RNA–Protein interactions for RNA: ENST00000588665.5
Retrieved 8 of 8 RNA–protein pairs in 2.8 ms
ABCA5-207, Transcript of ATP binding cassette subfamily A member 5, human
TSL 5
Gene ABCA5, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA5-207 | ENST00000588665 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 34.72 | ■■■■□ 3.15 | 4e-6 | ■■■■□ 24.8 |
ABCA5-207 | ENST00000588665 | CSTF2T | Q9H0L4 | 616 aa | Known RBP eCLIP | 18.76 | ■□□□□ 0.59 | 2e-6 | ■■■■□ 21.9 |
ABCA5-207 | ENST00000588665 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 16.9 | ■□□□□ 0.3 | 2e-8 | ■■■□□ 17.7 |
ABCA5-207 | ENST00000588665 | U2AF2 | P26368 | 475 aa | Known RBP eCLIP | 23.16 | ■■□□□ 1.3 | 2e-8 | ■■■□□ 14.7 |
ABCA5-207 | ENST00000588665 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 27.24 | ■■□□□ 1.95 | 2e-10 | ■■□□□ 13.7 |
ABCA5-207 | ENST00000588665 | HNRNPC | P07910 | 306 aa | Known RBP eCLIP | 15.3 | ■□□□□ 0.04 | 9e-7 | ■■□□□ 12.3 |
ABCA5-207 | ENST00000588665 | PRPF4 | O43172 | 522 aa | Known RBP eCLIP | 19.38 | ■□□□□ 0.69 | 6e-9 | ■□□□□ 10.3 |
ABCA5-207 | ENST00000588665 | XRN2 | Q9H0D6 | 950 aa | Known RBP eCLIP | 23.3 | ■■□□□ 1.32 | 5e-6 | ■□□□□ 8.4 |