RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 NISCHQ9Y2I1 1504 aa38.88■■■■□ 3.81
TRAPPC6A-204ENST00000588062 CCDC180Q9P1Z9 1646 aa34.8■■■■□ 3.16
TRAPPC6A-204ENST00000588062 ABCC9O60706 1549 aa34.71■■■■□ 3.15
TRAPPC6A-204ENST00000588062 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
TRAPPC6A-204ENST00000588062 NACADO15069 1562 aa32.89■■■□□ 2.86
TRAPPC6A-204ENST00000588062 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
TRAPPC6A-204ENST00000588062 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
TRAPPC6A-204ENST00000588062 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.79
TRAPPC6A-204ENST00000588062 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
TRAPPC6A-204ENST00000588062 UNC13AQ9UPW8 1703 aa32.35■■■□□ 2.77
TRAPPC6A-204ENST00000588062 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
TRAPPC6A-204ENST00000588062 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
TRAPPC6A-204ENST00000588062 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
TRAPPC6A-204ENST00000588062 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
TRAPPC6A-204ENST00000588062 SHROOM4Q9ULL8 1493 aa31.68■■■□□ 2.66
TRAPPC6A-204ENST00000588062 CC2D2AQ9P2K1 1620 aa31.36■■■□□ 2.61
TRAPPC6A-204ENST00000588062 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
TRAPPC6A-204ENST00000588062 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
TRAPPC6A-204ENST00000588062 NCAPD3P42695 1498 aa30.4■■■□□ 2.46
TRAPPC6A-204ENST00000588062 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
TRAPPC6A-204ENST00000588062 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
TRAPPC6A-204ENST00000588062 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
TRAPPC6A-204ENST00000588062 HMGXB3Q12766 1538 aa30.14■■■□□ 2.42
TRAPPC6A-204ENST00000588062 BAZ1AQ9NRL2 1556 aaPredicted RBP30.14■■■□□ 2.42
TRAPPC6A-204ENST00000588062 PEG3Q9GZU2 1588 aa30.01■■■□□ 2.39
TRAPPC6A-204ENST00000588062 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
TRAPPC6A-204ENST00000588062 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
TRAPPC6A-204ENST00000588062 ERCC6Q03468 1493 aa29.92■■■□□ 2.38
TRAPPC6A-204ENST00000588062 NESP48681 1621 aa29.88■■■□□ 2.37
TRAPPC6A-204ENST00000588062 CUX2O14529 1486 aa29.86■■■□□ 2.37
TRAPPC6A-204ENST00000588062 DNAJC5Q9H3Z4 198 aa29.77■■■□□ 2.36
TRAPPC6A-204ENST00000588062 LAMC3Q9Y6N6 1575 aa29.64■■■□□ 2.34
TRAPPC6A-204ENST00000588062 WIZO95785 1651 aa29.6■■■□□ 2.33
TRAPPC6A-204ENST00000588062 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
TRAPPC6A-204ENST00000588062 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
TRAPPC6A-204ENST00000588062 CADPSQ9ULU8 1353 aa29.47■■■□□ 2.31
TRAPPC6A-204ENST00000588062 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
TRAPPC6A-204ENST00000588062 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
TRAPPC6A-204ENST00000588062 MRC2Q9UBG0 1479 aa29.22■■■□□ 2.27
TRAPPC6A-204ENST00000588062 TOP2AP11388 1531 aaKnown RBP29.21■■■□□ 2.27
TRAPPC6A-204ENST00000588062 CFTRP13569 1480 aa29.16■■■□□ 2.26
TRAPPC6A-204ENST00000588062 WDR62O43379 1518 aa29.15■■■□□ 2.26
TRAPPC6A-204ENST00000588062 FANCD2Q9BXW9 1451 aa29.11■■■□□ 2.25
TRAPPC6A-204ENST00000588062 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
TRAPPC6A-204ENST00000588062 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
TRAPPC6A-204ENST00000588062 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.21
TRAPPC6A-204ENST00000588062 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
TRAPPC6A-204ENST00000588062 TOPBP1Q92547 1522 aa28.59■■■□□ 2.17
TRAPPC6A-204ENST00000588062 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
TRAPPC6A-204ENST00000588062 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
TRAPPC6A-204ENST00000588062 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
TRAPPC6A-204ENST00000588062 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC6A-204ENST00000588062 DNMBPQ6XZF7 1577 aa28.47■■■□□ 2.15
TRAPPC6A-204ENST00000588062 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
TRAPPC6A-204ENST00000588062 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
TRAPPC6A-204ENST00000588062 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
TRAPPC6A-204ENST00000588062 POLA1P09884 1462 aaPredicted RBP28.3■■■□□ 2.12
TRAPPC6A-204ENST00000588062 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.128e-11■■■■■ 72.6
TRAPPC6A-204ENST00000588062 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
TRAPPC6A-204ENST00000588062 SOGA1O94964 1423 aa28.18■■■□□ 2.1
TRAPPC6A-204ENST00000588062 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
TRAPPC6A-204ENST00000588062 CUX1P39880 1505 aa28.14■■■□□ 2.1
TRAPPC6A-204ENST00000588062 RIMBP3CA6NJZ7 1639 aa28.13■■■□□ 2.09
TRAPPC6A-204ENST00000588062 RIMBP3BA6NNM3 1639 aa28.13■■■□□ 2.09
TRAPPC6A-204ENST00000588062 RIMBP3Q9UFD9 1639 aa28.13■■■□□ 2.09
TRAPPC6A-204ENST00000588062 FGD5Q6ZNL6 1462 aa28.13■■■□□ 2.09
TRAPPC6A-204ENST00000588062 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
TRAPPC6A-204ENST00000588062 CHD1O14646 1710 aa28.09■■■□□ 2.09
TRAPPC6A-204ENST00000588062 ARHGEF11O15085 1522 aa28.07■■■□□ 2.08
TRAPPC6A-204ENST00000588062 FBLN2P98095 1184 aa28.02■■■□□ 2.08
TRAPPC6A-204ENST00000588062 WDR97A6NE52 1622 aa28■■■□□ 2.07
TRAPPC6A-204ENST00000588062 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.06
TRAPPC6A-204ENST00000588062 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
TRAPPC6A-204ENST00000588062 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.05
TRAPPC6A-204ENST00000588062 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
TRAPPC6A-204ENST00000588062 CHMP7Q8WUX9 453 aaPredicted RBP27.84■■■□□ 2.05
TRAPPC6A-204ENST00000588062 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
TRAPPC6A-204ENST00000588062 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
TRAPPC6A-204ENST00000588062 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
TRAPPC6A-204ENST00000588062 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
TRAPPC6A-204ENST00000588062 SYNJ2O15056 1496 aa27.79■■■□□ 2.04
TRAPPC6A-204ENST00000588062 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
TRAPPC6A-204ENST00000588062 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
TRAPPC6A-204ENST00000588062 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
TRAPPC6A-204ENST00000588062 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
TRAPPC6A-204ENST00000588062 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.03
TRAPPC6A-204ENST00000588062 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
TRAPPC6A-204ENST00000588062 GRIN2AQ12879 1464 aa27.55■■■□□ 2
TRAPPC6A-204ENST00000588062 ADAMTS12P58397 1594 aa27.53■■■□□ 2
TRAPPC6A-204ENST00000588062 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC6A-204ENST00000588062 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
TRAPPC6A-204ENST00000588062 NUP160Q12769 1436 aa27.48■■□□□ 1.99
TRAPPC6A-204ENST00000588062 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
TRAPPC6A-204ENST00000588062 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
TRAPPC6A-204ENST00000588062 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
TRAPPC6A-204ENST00000588062 SHROOM2Q13796 1616 aa27.32■■□□□ 1.96
TRAPPC6A-204ENST00000588062 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
TRAPPC6A-204ENST00000588062 IGF1RP08069 1367 aa27.2■■□□□ 1.94
TRAPPC6A-204ENST00000588062 PRG4Q92954 1404 aaPredicted RBP27.18■■□□□ 1.94
TRAPPC6A-204ENST00000588062 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 435 ms