RNA–Protein interactions for RNA: ENST00000587758.5

TNNT1-209, Transcript of troponin T1, slow skeletal type, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNNT1, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT1-209ENST00000587758 NISCHQ9Y2I1 1504 aa37.74■■■■□ 3.63
TNNT1-209ENST00000587758 ABCC9O60706 1549 aa34.34■■■■□ 3.09
TNNT1-209ENST00000587758 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
TNNT1-209ENST00000587758 DNAJC5BQ9UF47 199 aa32.67■■■□□ 2.82
TNNT1-209ENST00000587758 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
TNNT1-209ENST00000587758 NACADO15069 1562 aa32.11■■■□□ 2.73
TNNT1-209ENST00000587758 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
TNNT1-209ENST00000587758 UNC13AQ9UPW8 1703 aa31.94■■■□□ 2.7
TNNT1-209ENST00000587758 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
TNNT1-209ENST00000587758 BICRAQ9NZM4 1560 aa31.71■■■□□ 2.67
TNNT1-209ENST00000587758 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
TNNT1-209ENST00000587758 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
TNNT1-209ENST00000587758 DCAF1Q9Y4B6 1507 aa31.07■■■□□ 2.56
TNNT1-209ENST00000587758 SCRIBQ14160 1630 aa31.01■■■□□ 2.55
TNNT1-209ENST00000587758 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
TNNT1-209ENST00000587758 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
TNNT1-209ENST00000587758 CECR2Q9BXF3 1484 aa30.89■■■□□ 2.54
TNNT1-209ENST00000587758 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
TNNT1-209ENST00000587758 DNAJC5Q9H3Z4 198 aa30■■■□□ 2.39
TNNT1-209ENST00000587758 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
TNNT1-209ENST00000587758 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
TNNT1-209ENST00000587758 CUX2O14529 1486 aa29.55■■■□□ 2.32
TNNT1-209ENST00000587758 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
TNNT1-209ENST00000587758 ERCC6Q03468 1493 aa29.5■■■□□ 2.31
TNNT1-209ENST00000587758 NESP48681 1621 aa29.5■■■□□ 2.31
TNNT1-209ENST00000587758 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
TNNT1-209ENST00000587758 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
TNNT1-209ENST00000587758 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
TNNT1-209ENST00000587758 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
TNNT1-209ENST00000587758 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
TNNT1-209ENST00000587758 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
TNNT1-209ENST00000587758 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
TNNT1-209ENST00000587758 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
TNNT1-209ENST00000587758 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
TNNT1-209ENST00000587758 WIZO95785 1651 aa28.82■■■□□ 2.2
TNNT1-209ENST00000587758 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
TNNT1-209ENST00000587758 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.2
TNNT1-209ENST00000587758 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
TNNT1-209ENST00000587758 WDR62O43379 1518 aa28.64■■■□□ 2.18
TNNT1-209ENST00000587758 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
TNNT1-209ENST00000587758 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
TNNT1-209ENST00000587758 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
TNNT1-209ENST00000587758 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
TNNT1-209ENST00000587758 CFTRP13569 1480 aa28.4■■■□□ 2.14
TNNT1-209ENST00000587758 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
TNNT1-209ENST00000587758 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
TNNT1-209ENST00000587758 OSCARQ8IYS5 282 aa28.15■■■□□ 2.1
TNNT1-209ENST00000587758 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
TNNT1-209ENST00000587758 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
TNNT1-209ENST00000587758 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
TNNT1-209ENST00000587758 RIMBP3CA6NJZ7 1639 aa27.98■■■□□ 2.07
TNNT1-209ENST00000587758 RIMBP3BA6NNM3 1639 aa27.98■■■□□ 2.07
TNNT1-209ENST00000587758 RIMBP3Q9UFD9 1639 aa27.98■■■□□ 2.07
TNNT1-209ENST00000587758 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
TNNT1-209ENST00000587758 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
TNNT1-209ENST00000587758 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
TNNT1-209ENST00000587758 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
TNNT1-209ENST00000587758 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
TNNT1-209ENST00000587758 DNMBPQ6XZF7 1577 aa27.75■■■□□ 2.03
TNNT1-209ENST00000587758 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.037e-7■■■■□ 24.2
TNNT1-209ENST00000587758 CHD1O14646 1710 aa27.73■■■□□ 2.03
TNNT1-209ENST00000587758 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
TNNT1-209ENST00000587758 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
TNNT1-209ENST00000587758 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
TNNT1-209ENST00000587758 RAD54L2Q9Y4B4 1467 aa27.61■■■□□ 2.01
TNNT1-209ENST00000587758 ARAP1Q96P48 1450 aa27.57■■■□□ 2
TNNT1-209ENST00000587758 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
TNNT1-209ENST00000587758 FBLN2P98095 1184 aa27.49■■□□□ 1.99
TNNT1-209ENST00000587758 SOGA1O94964 1423 aa27.44■■□□□ 1.98
TNNT1-209ENST00000587758 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
TNNT1-209ENST00000587758 CUX1P39880 1505 aa27.41■■□□□ 1.98
TNNT1-209ENST00000587758 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
TNNT1-209ENST00000587758 CLASP1Q7Z460 1538 aa27.37■■□□□ 1.97
TNNT1-209ENST00000587758 TRHP20396 242 aaPredicted RBP27.31■■□□□ 1.96
TNNT1-209ENST00000587758 WDR97A6NE52 1622 aa27.28■■□□□ 1.96
TNNT1-209ENST00000587758 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
TNNT1-209ENST00000587758 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
TNNT1-209ENST00000587758 CHMP7Q8WUX9 453 aaPredicted RBP27.19■■□□□ 1.94
TNNT1-209ENST00000587758 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
TNNT1-209ENST00000587758 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
TNNT1-209ENST00000587758 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
TNNT1-209ENST00000587758 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
TNNT1-209ENST00000587758 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
TNNT1-209ENST00000587758 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
TNNT1-209ENST00000587758 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
TNNT1-209ENST00000587758 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
TNNT1-209ENST00000587758 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
TNNT1-209ENST00000587758 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
TNNT1-209ENST00000587758 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
TNNT1-209ENST00000587758 NUP160Q12769 1436 aa26.84■■□□□ 1.89
TNNT1-209ENST00000587758 BIVM-ERCC5R4GMW8 1640 aa26.83■■□□□ 1.88
TNNT1-209ENST00000587758 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
TNNT1-209ENST00000587758 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
TNNT1-209ENST00000587758 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
TNNT1-209ENST00000587758 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
TNNT1-209ENST00000587758 KIF13AQ9H1H9 1805 aa26.68■■□□□ 1.86
TNNT1-209ENST00000587758 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
TNNT1-209ENST00000587758 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
TNNT1-209ENST00000587758 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
TNNT1-209ENST00000587758 JPH4Q96JJ6 628 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms