RNA–Protein interactions for RNA: ENST00000587634.5

NEDD4L-219, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-219ENST00000587634 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
NEDD4L-219ENST00000587634 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
NEDD4L-219ENST00000587634 ABCC9O60706 1549 aa24.67■■□□□ 1.54
NEDD4L-219ENST00000587634 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
NEDD4L-219ENST00000587634 NACADO15069 1562 aa23.42■■□□□ 1.34
NEDD4L-219ENST00000587634 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
NEDD4L-219ENST00000587634 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
NEDD4L-219ENST00000587634 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
NEDD4L-219ENST00000587634 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
NEDD4L-219ENST00000587634 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
NEDD4L-219ENST00000587634 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
NEDD4L-219ENST00000587634 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
NEDD4L-219ENST00000587634 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
NEDD4L-219ENST00000587634 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
NEDD4L-219ENST00000587634 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
NEDD4L-219ENST00000587634 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-219ENST00000587634 CC2D2AQ9P2K1 1620 aa22.29■■□□□ 1.16
NEDD4L-219ENST00000587634 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
NEDD4L-219ENST00000587634 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
NEDD4L-219ENST00000587634 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
NEDD4L-219ENST00000587634 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
NEDD4L-219ENST00000587634 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
NEDD4L-219ENST00000587634 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
NEDD4L-219ENST00000587634 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
NEDD4L-219ENST00000587634 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
NEDD4L-219ENST00000587634 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
NEDD4L-219ENST00000587634 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
NEDD4L-219ENST00000587634 NESP48681 1621 aa21.33■■□□□ 1
NEDD4L-219ENST00000587634 WIZO95785 1651 aa21.26■□□□□ 0.99
NEDD4L-219ENST00000587634 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
NEDD4L-219ENST00000587634 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
NEDD4L-219ENST00000587634 CUX2O14529 1486 aa21.08■□□□□ 0.97
NEDD4L-219ENST00000587634 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
NEDD4L-219ENST00000587634 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
NEDD4L-219ENST00000587634 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
NEDD4L-219ENST00000587634 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
NEDD4L-219ENST00000587634 TOP2AP11388 1531 aaKnown RBP20.95■□□□□ 0.94
NEDD4L-219ENST00000587634 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
NEDD4L-219ENST00000587634 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
NEDD4L-219ENST00000587634 CFTRP13569 1480 aa20.85■□□□□ 0.93
NEDD4L-219ENST00000587634 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
NEDD4L-219ENST00000587634 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
NEDD4L-219ENST00000587634 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
NEDD4L-219ENST00000587634 WDR62O43379 1518 aa20.75■□□□□ 0.91
NEDD4L-219ENST00000587634 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
NEDD4L-219ENST00000587634 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-219ENST00000587634 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
NEDD4L-219ENST00000587634 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
NEDD4L-219ENST00000587634 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
NEDD4L-219ENST00000587634 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
NEDD4L-219ENST00000587634 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
NEDD4L-219ENST00000587634 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
NEDD4L-219ENST00000587634 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
NEDD4L-219ENST00000587634 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
NEDD4L-219ENST00000587634 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
NEDD4L-219ENST00000587634 CUX1P39880 1505 aa20.21■□□□□ 0.83
NEDD4L-219ENST00000587634 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
NEDD4L-219ENST00000587634 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.823e-6■■■□□ 15.8
NEDD4L-219ENST00000587634 EIF4G3O43432 1585 aaKnown RBP20.18■□□□□ 0.82
NEDD4L-219ENST00000587634 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
NEDD4L-219ENST00000587634 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
NEDD4L-219ENST00000587634 SOGA1O94964 1423 aa20.12■□□□□ 0.81
NEDD4L-219ENST00000587634 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
NEDD4L-219ENST00000587634 TRIM41Q8WV44 630 aa20■□□□□ 0.79
NEDD4L-219ENST00000587634 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
NEDD4L-219ENST00000587634 CHD1O14646 1710 aa19.98■□□□□ 0.79
NEDD4L-219ENST00000587634 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
NEDD4L-219ENST00000587634 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
NEDD4L-219ENST00000587634 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
NEDD4L-219ENST00000587634 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
NEDD4L-219ENST00000587634 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
NEDD4L-219ENST00000587634 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
NEDD4L-219ENST00000587634 FBLN2P98095 1184 aa19.9■□□□□ 0.78
NEDD4L-219ENST00000587634 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
NEDD4L-219ENST00000587634 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
NEDD4L-219ENST00000587634 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
NEDD4L-219ENST00000587634 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
NEDD4L-219ENST00000587634 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
NEDD4L-219ENST00000587634 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
NEDD4L-219ENST00000587634 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
NEDD4L-219ENST00000587634 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
NEDD4L-219ENST00000587634 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
NEDD4L-219ENST00000587634 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
NEDD4L-219ENST00000587634 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
NEDD4L-219ENST00000587634 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
NEDD4L-219ENST00000587634 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
NEDD4L-219ENST00000587634 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
NEDD4L-219ENST00000587634 ADAMTS12P58397 1594 aa19.69■□□□□ 0.74
NEDD4L-219ENST00000587634 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
NEDD4L-219ENST00000587634 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
NEDD4L-219ENST00000587634 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
NEDD4L-219ENST00000587634 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
NEDD4L-219ENST00000587634 NUP160Q12769 1436 aa19.62■□□□□ 0.73
NEDD4L-219ENST00000587634 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
NEDD4L-219ENST00000587634 IGF1RP08069 1367 aa19.54■□□□□ 0.72
NEDD4L-219ENST00000587634 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
NEDD4L-219ENST00000587634 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
NEDD4L-219ENST00000587634 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
NEDD4L-219ENST00000587634 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
NEDD4L-219ENST00000587634 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms