RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 AQRO60306 1485 aaKnown RBP eCLIP41.3■■■■■ 4.29e-7■■■■■ 48.6
CHAF1A-205ENST00000587580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.13■■□□□ 1.459e-11■■■■■ 45.3
CHAF1A-205ENST00000587580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.9■■■■□ 3.661e-6■■■■■ 42.9
CHAF1A-205ENST00000587580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.93■■■■□ 3.341e-11■■■■■ 36.5
CHAF1A-205ENST00000587580 NCBP2P52298 156 aaKnown RBP eCLIP21.62■■□□□ 1.058e-8■■■■■ 33.5
CHAF1A-205ENST00000587580 NOL12Q9UGY1 213 aaKnown RBP eCLIP22■■□□□ 1.111e-9■■■■■ 32.2
CHAF1A-205ENST00000587580 EFTUD2Q15029 972 aaKnown RBP eCLIP22.43■■□□□ 1.181e-8■■■■□ 26.7
CHAF1A-205ENST00000587580 DDX6P26196 483 aaKnown RBP eCLIP24.99■■□□□ 1.599e-7■■■■□ 26.7
CHAF1A-205ENST00000587580 EIF3HO15372 352 aaKnown RBP eCLIP22.59■■□□□ 1.211e-25■■■■□ 26.2
CHAF1A-205ENST00000587580 DDX3XO00571 662 aaKnown RBP eCLIP24.17■■□□□ 1.466e-21■■■■□ 24.4
CHAF1A-205ENST00000587580 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.66■■□□□ 1.066e-6■■■■□ 22.6
CHAF1A-205ENST00000587580 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■■■□ 21.2
CHAF1A-205ENST00000587580 ILF3Q12906 894 aaKnown RBP eCLIP23.34■■□□□ 1.337e-6■■■■□ 19.9
CHAF1A-205ENST00000587580 SRSF1Q07955 248 aaKnown RBP eCLIP21.85■■□□□ 1.092e-8■■□□□ 14.5
CHAF1A-205ENST00000587580 FMR1Q06787 632 aaKnown RBP eCLIP29.3■■■□□ 2.284e-11■■□□□ 12.4
CHAF1A-205ENST00000587580 AARSP49588 968 aaKnown RBP eCLIP25.45■■□□□ 1.663e-6■□□□□ 10.9
CHAF1A-205ENST00000587580 TROVE2P10155 538 aaKnown RBP eCLIP21.04■□□□□ 0.961e-6■□□□□ 10
CHAF1A-205ENST00000587580 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.76■■□□□ 1.872e-11■□□□□ 9.2
CHAF1A-205ENST00000587580 FTOQ9C0B1 505 aaKnown RBP eCLIP26.63■■□□□ 1.851e-7■□□□□ 8.2
Retrieved 19 of 19 RNA–protein pairs in 226.4 ms