RNA–Protein interactions for RNA: ENST00000587412.1

AF038458.2-201, humanhuman

TSL 3 BASIC

Gene AF038458.2, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF038458.2-201ENST00000587412 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
AF038458.2-201ENST00000587412 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
AF038458.2-201ENST00000587412 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
AF038458.2-201ENST00000587412 ABCC9O60706 1549 aa22.09■■□□□ 1.13
AF038458.2-201ENST00000587412 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
AF038458.2-201ENST00000587412 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
AF038458.2-201ENST00000587412 NACADO15069 1562 aa21.22■□□□□ 0.99
AF038458.2-201ENST00000587412 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
AF038458.2-201ENST00000587412 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
AF038458.2-201ENST00000587412 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
AF038458.2-201ENST00000587412 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
AF038458.2-201ENST00000587412 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
AF038458.2-201ENST00000587412 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
AF038458.2-201ENST00000587412 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
AF038458.2-201ENST00000587412 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
AF038458.2-201ENST00000587412 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
AF038458.2-201ENST00000587412 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
AF038458.2-201ENST00000587412 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
AF038458.2-201ENST00000587412 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
AF038458.2-201ENST00000587412 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
AF038458.2-201ENST00000587412 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
AF038458.2-201ENST00000587412 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
AF038458.2-201ENST00000587412 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
AF038458.2-201ENST00000587412 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
AF038458.2-201ENST00000587412 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
AF038458.2-201ENST00000587412 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
AF038458.2-201ENST00000587412 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
AF038458.2-201ENST00000587412 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
AF038458.2-201ENST00000587412 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
AF038458.2-201ENST00000587412 WIZO95785 1651 aa19.32■□□□□ 0.68
AF038458.2-201ENST00000587412 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
AF038458.2-201ENST00000587412 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
AF038458.2-201ENST00000587412 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
AF038458.2-201ENST00000587412 NESP48681 1621 aa19.12■□□□□ 0.65
AF038458.2-201ENST00000587412 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
AF038458.2-201ENST00000587412 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
AF038458.2-201ENST00000587412 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
AF038458.2-201ENST00000587412 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
AF038458.2-201ENST00000587412 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
AF038458.2-201ENST00000587412 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
AF038458.2-201ENST00000587412 CUX2O14529 1486 aa18.9■□□□□ 0.62
AF038458.2-201ENST00000587412 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
AF038458.2-201ENST00000587412 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
AF038458.2-201ENST00000587412 CFTRP13569 1480 aa18.84■□□□□ 0.61
AF038458.2-201ENST00000587412 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
AF038458.2-201ENST00000587412 MRC2Q9UBG0 1479 aa18.74■□□□□ 0.59
AF038458.2-201ENST00000587412 WDR62O43379 1518 aa18.74■□□□□ 0.59
AF038458.2-201ENST00000587412 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
AF038458.2-201ENST00000587412 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
AF038458.2-201ENST00000587412 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
AF038458.2-201ENST00000587412 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
AF038458.2-201ENST00000587412 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
AF038458.2-201ENST00000587412 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
AF038458.2-201ENST00000587412 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
AF038458.2-201ENST00000587412 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
AF038458.2-201ENST00000587412 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
AF038458.2-201ENST00000587412 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
AF038458.2-201ENST00000587412 CUX1P39880 1505 aa18.3■□□□□ 0.52
AF038458.2-201ENST00000587412 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
AF038458.2-201ENST00000587412 EIF4G3O43432 1585 aaKnown RBP18.29■□□□□ 0.52
AF038458.2-201ENST00000587412 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
AF038458.2-201ENST00000587412 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
AF038458.2-201ENST00000587412 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
AF038458.2-201ENST00000587412 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
AF038458.2-201ENST00000587412 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
AF038458.2-201ENST00000587412 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
AF038458.2-201ENST00000587412 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
AF038458.2-201ENST00000587412 SOGA1O94964 1423 aa18.14■□□□□ 0.49
AF038458.2-201ENST00000587412 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
AF038458.2-201ENST00000587412 CHD1O14646 1710 aa18.12■□□□□ 0.49
AF038458.2-201ENST00000587412 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
AF038458.2-201ENST00000587412 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
AF038458.2-201ENST00000587412 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
AF038458.2-201ENST00000587412 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
AF038458.2-201ENST00000587412 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
AF038458.2-201ENST00000587412 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
AF038458.2-201ENST00000587412 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
AF038458.2-201ENST00000587412 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
AF038458.2-201ENST00000587412 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
AF038458.2-201ENST00000587412 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
AF038458.2-201ENST00000587412 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
AF038458.2-201ENST00000587412 SYNJ2O15056 1496 aa17.89■□□□□ 0.45
AF038458.2-201ENST00000587412 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
AF038458.2-201ENST00000587412 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
AF038458.2-201ENST00000587412 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
AF038458.2-201ENST00000587412 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
AF038458.2-201ENST00000587412 CLASP1Q7Z460 1538 aa17.87■□□□□ 0.45
AF038458.2-201ENST00000587412 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
AF038458.2-201ENST00000587412 ARHGEF11O15085 1522 aa17.83■□□□□ 0.45
AF038458.2-201ENST00000587412 FBLN2P98095 1184 aa17.8■□□□□ 0.44
AF038458.2-201ENST00000587412 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
AF038458.2-201ENST00000587412 FOXD1Q16676 465 aa17.77■□□□□ 0.44
AF038458.2-201ENST00000587412 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
AF038458.2-201ENST00000587412 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
AF038458.2-201ENST00000587412 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
AF038458.2-201ENST00000587412 CUL7Q14999 1698 aa17.71■□□□□ 0.43
AF038458.2-201ENST00000587412 NUP160Q12769 1436 aa17.71■□□□□ 0.43
AF038458.2-201ENST00000587412 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
AF038458.2-201ENST00000587412 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
AF038458.2-201ENST00000587412 SHROOM2Q13796 1616 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms