RNA–Protein interactions for RNA: ENST00000586811.1
Retrieved 4 of 4 RNA–protein pairs in 9.5 ms
ABCA5-203, Transcript of ATP binding cassette subfamily A member 5, human
TSL 5
Gene ABCA5, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA5-203 | ENST00000586811 | SF3A3 | Q12874 | 501 aa | Known RBP eCLIP | 8.39 | □□□□□ -1.07 | 5e-6 | ■■■■■ 35.2 |
ABCA5-203 | ENST00000586811 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 7.78 | □□□□□ -1.16 | 5e-8 | ■■■■■ 27 |
ABCA5-203 | ENST00000586811 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 8.47 | □□□□□ -1.05 | 1e-5 | ■■■■□ 21.5 |
ABCA5-203 | ENST00000586811 | BCLAF1 | Q9NYF8 | 920 aa | Known RBP eCLIP | 13.04 | □□□□□ -0.32 | 1e-6 | ■■□□□ 14.2 |