RNA–Protein interactions for RNA: ENST00000586426.5

ZNF556-202, Transcript of zinc finger protein 556, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF556, Length 1,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-202ENST00000586426 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
ZNF556-202ENST00000586426 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
ZNF556-202ENST00000586426 ABCC9O60706 1549 aa28.01■■■□□ 2.07
ZNF556-202ENST00000586426 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
ZNF556-202ENST00000586426 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
ZNF556-202ENST00000586426 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
ZNF556-202ENST00000586426 NACADO15069 1562 aa27.21■■□□□ 1.95
ZNF556-202ENST00000586426 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
ZNF556-202ENST00000586426 RB1CC1Q8TDY2 1594 aa27.12■■□□□ 1.93
ZNF556-202ENST00000586426 SCRIBQ14160 1630 aa26.59■■□□□ 1.85
ZNF556-202ENST00000586426 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
ZNF556-202ENST00000586426 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.84
ZNF556-202ENST00000586426 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
ZNF556-202ENST00000586426 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
ZNF556-202ENST00000586426 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
ZNF556-202ENST00000586426 EIF4G1Q04637 1599 aaKnown RBP25.54■■□□□ 1.68
ZNF556-202ENST00000586426 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
ZNF556-202ENST00000586426 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
ZNF556-202ENST00000586426 MROH2BQ7Z745 1585 aa25.46■■□□□ 1.67
ZNF556-202ENST00000586426 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
ZNF556-202ENST00000586426 CC2D2AQ9P2K1 1620 aa25.32■■□□□ 1.64
ZNF556-202ENST00000586426 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
ZNF556-202ENST00000586426 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
ZNF556-202ENST00000586426 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
ZNF556-202ENST00000586426 WIZO95785 1651 aa25.22■■□□□ 1.63
ZNF556-202ENST00000586426 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
ZNF556-202ENST00000586426 PEG3Q9GZU2 1588 aa25.19■■□□□ 1.62
ZNF556-202ENST00000586426 NCAPD3P42695 1498 aa25.14■■□□□ 1.61
ZNF556-202ENST00000586426 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
ZNF556-202ENST00000586426 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
ZNF556-202ENST00000586426 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
ZNF556-202ENST00000586426 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
ZNF556-202ENST00000586426 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
ZNF556-202ENST00000586426 CFTRP13569 1480 aa24.4■■□□□ 1.5
ZNF556-202ENST00000586426 NESP48681 1621 aa24.38■■□□□ 1.49
ZNF556-202ENST00000586426 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
ZNF556-202ENST00000586426 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
ZNF556-202ENST00000586426 PRDM2Q13029 1718 aa24.19■■□□□ 1.46
ZNF556-202ENST00000586426 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
ZNF556-202ENST00000586426 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
ZNF556-202ENST00000586426 KIF21AQ7Z4S6 1674 aa24.07■■□□□ 1.44
ZNF556-202ENST00000586426 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
ZNF556-202ENST00000586426 ABCC8Q09428 1581 aa23.96■■□□□ 1.43
ZNF556-202ENST00000586426 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
ZNF556-202ENST00000586426 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.42
ZNF556-202ENST00000586426 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
ZNF556-202ENST00000586426 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
ZNF556-202ENST00000586426 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
ZNF556-202ENST00000586426 CUX1P39880 1505 aa23.83■■□□□ 1.41
ZNF556-202ENST00000586426 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
ZNF556-202ENST00000586426 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
ZNF556-202ENST00000586426 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
ZNF556-202ENST00000586426 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
ZNF556-202ENST00000586426 WDR62O43379 1518 aa23.77■■□□□ 1.4
ZNF556-202ENST00000586426 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
ZNF556-202ENST00000586426 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
ZNF556-202ENST00000586426 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
ZNF556-202ENST00000586426 POLA1P09884 1462 aaPredicted RBP23.65■■□□□ 1.38
ZNF556-202ENST00000586426 SOGA1O94964 1423 aa23.63■■□□□ 1.37
ZNF556-202ENST00000586426 CUX2O14529 1486 aa23.59■■□□□ 1.37
ZNF556-202ENST00000586426 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
ZNF556-202ENST00000586426 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
ZNF556-202ENST00000586426 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
ZNF556-202ENST00000586426 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
ZNF556-202ENST00000586426 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
ZNF556-202ENST00000586426 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
ZNF556-202ENST00000586426 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.33
ZNF556-202ENST00000586426 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
ZNF556-202ENST00000586426 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
ZNF556-202ENST00000586426 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
ZNF556-202ENST00000586426 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
ZNF556-202ENST00000586426 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.33
ZNF556-202ENST00000586426 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
ZNF556-202ENST00000586426 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
ZNF556-202ENST00000586426 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
ZNF556-202ENST00000586426 EEA1Q15075 1411 aa23.27■■□□□ 1.31
ZNF556-202ENST00000586426 IGF1RP08069 1367 aa23.25■■□□□ 1.31
ZNF556-202ENST00000586426 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
ZNF556-202ENST00000586426 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
ZNF556-202ENST00000586426 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
ZNF556-202ENST00000586426 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
ZNF556-202ENST00000586426 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
ZNF556-202ENST00000586426 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
ZNF556-202ENST00000586426 FBLN2P98095 1184 aa23.09■■□□□ 1.29
ZNF556-202ENST00000586426 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
ZNF556-202ENST00000586426 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
ZNF556-202ENST00000586426 CUL7Q14999 1698 aa23.06■■□□□ 1.28
ZNF556-202ENST00000586426 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
ZNF556-202ENST00000586426 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
ZNF556-202ENST00000586426 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
ZNF556-202ENST00000586426 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
ZNF556-202ENST00000586426 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
ZNF556-202ENST00000586426 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
ZNF556-202ENST00000586426 KIF21BO75037 1637 aa22.94■■□□□ 1.26
ZNF556-202ENST00000586426 UBTFP17480 764 aaKnown RBP22.93■■□□□ 1.26
ZNF556-202ENST00000586426 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
ZNF556-202ENST00000586426 CHD1O14646 1710 aa22.91■■□□□ 1.26
ZNF556-202ENST00000586426 GOLGA3Q08378 1498 aa22.88■■□□□ 1.25
ZNF556-202ENST00000586426 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
ZNF556-202ENST00000586426 NUP160Q12769 1436 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms