RNA–Protein interactions for RNA: ENST00000586409.5

UBE2O-202, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

TSL 2

Gene UBE2O, Length 3,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-202ENST00000586409 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
UBE2O-202ENST00000586409 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
UBE2O-202ENST00000586409 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
UBE2O-202ENST00000586409 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
UBE2O-202ENST00000586409 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
UBE2O-202ENST00000586409 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
UBE2O-202ENST00000586409 HRCP23327 699 aa26.49■■□□□ 1.83
UBE2O-202ENST00000586409 PELP1Q8IZL8 1130 aaKnown RBP26.47■■□□□ 1.83
UBE2O-202ENST00000586409 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
UBE2O-202ENST00000586409 PPARGC1BQ86YN6 1023 aaKnown RBP26.33■■□□□ 1.81
UBE2O-202ENST00000586409 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
UBE2O-202ENST00000586409 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
UBE2O-202ENST00000586409 SCRIBQ14160 1630 aa25.72■■□□□ 1.71
UBE2O-202ENST00000586409 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
UBE2O-202ENST00000586409 ABCC9O60706 1549 aa25.67■■□□□ 1.7
UBE2O-202ENST00000586409 MYT1Q01538 1121 aa25.58■■□□□ 1.69
UBE2O-202ENST00000586409 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
UBE2O-202ENST00000586409 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.66
UBE2O-202ENST00000586409 NACADO15069 1562 aa25.39■■□□□ 1.66
UBE2O-202ENST00000586409 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
UBE2O-202ENST00000586409 RB1CC1Q8TDY2 1594 aa25.1■■□□□ 1.61
UBE2O-202ENST00000586409 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
UBE2O-202ENST00000586409 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
UBE2O-202ENST00000586409 WIZO95785 1651 aa24.92■■□□□ 1.58
UBE2O-202ENST00000586409 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
UBE2O-202ENST00000586409 GTF3C3Q9Y5Q9 886 aa24.77■■□□□ 1.56
UBE2O-202ENST00000586409 NEUROD1Q13562 356 aa24.7■■□□□ 1.55
UBE2O-202ENST00000586409 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
UBE2O-202ENST00000586409 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
UBE2O-202ENST00000586409 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
UBE2O-202ENST00000586409 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
UBE2O-202ENST00000586409 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
UBE2O-202ENST00000586409 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
UBE2O-202ENST00000586409 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
UBE2O-202ENST00000586409 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
UBE2O-202ENST00000586409 FAM9AQ8IZU1 332 aaPredicted RBP24.53■■□□□ 1.52
UBE2O-202ENST00000586409 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
UBE2O-202ENST00000586409 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
UBE2O-202ENST00000586409 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
UBE2O-202ENST00000586409 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
UBE2O-202ENST00000586409 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
UBE2O-202ENST00000586409 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
UBE2O-202ENST00000586409 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
UBE2O-202ENST00000586409 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
UBE2O-202ENST00000586409 BCL11AQ9H165 835 aa24.16■■□□□ 1.46
UBE2O-202ENST00000586409 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
UBE2O-202ENST00000586409 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
UBE2O-202ENST00000586409 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
UBE2O-202ENST00000586409 SOGA1O94964 1423 aa23.98■■□□□ 1.43
UBE2O-202ENST00000586409 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
UBE2O-202ENST00000586409 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
UBE2O-202ENST00000586409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.95■■□□□ 1.42
UBE2O-202ENST00000586409 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
UBE2O-202ENST00000586409 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
UBE2O-202ENST00000586409 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
UBE2O-202ENST00000586409 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
UBE2O-202ENST00000586409 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.38
UBE2O-202ENST00000586409 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
UBE2O-202ENST00000586409 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
UBE2O-202ENST00000586409 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
UBE2O-202ENST00000586409 EEA1Q15075 1411 aa23.59■■□□□ 1.37
UBE2O-202ENST00000586409 PRKCSHP14314 528 aaPredicted RBP23.58■■□□□ 1.36
UBE2O-202ENST00000586409 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
UBE2O-202ENST00000586409 UBTFP17480 764 aaKnown RBP23.51■■□□□ 1.35
UBE2O-202ENST00000586409 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
UBE2O-202ENST00000586409 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
UBE2O-202ENST00000586409 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
UBE2O-202ENST00000586409 KIF21BO75037 1637 aa23.4■■□□□ 1.34
UBE2O-202ENST00000586409 MIER1Q8N108 512 aa23.39■■□□□ 1.33
UBE2O-202ENST00000586409 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
UBE2O-202ENST00000586409 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
UBE2O-202ENST00000586409 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
UBE2O-202ENST00000586409 CUX1P39880 1505 aa23.33■■□□□ 1.33
UBE2O-202ENST00000586409 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.32
UBE2O-202ENST00000586409 CFTRP13569 1480 aa23.31■■□□□ 1.32
UBE2O-202ENST00000586409 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
UBE2O-202ENST00000586409 CLIP1P30622 1438 aa23.22■■□□□ 1.31
UBE2O-202ENST00000586409 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.31
UBE2O-202ENST00000586409 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
UBE2O-202ENST00000586409 BCANQ96GW7 911 aa23.19■■□□□ 1.3
UBE2O-202ENST00000586409 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
UBE2O-202ENST00000586409 CC2D2AQ9P2K1 1620 aa23.14■■□□□ 1.3
UBE2O-202ENST00000586409 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
UBE2O-202ENST00000586409 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
UBE2O-202ENST00000586409 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
UBE2O-202ENST00000586409 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
UBE2O-202ENST00000586409 KIF27Q86VH2 1401 aa23.01■■□□□ 1.27
UBE2O-202ENST00000586409 ERICH6Q7L0X2 663 aa23.01■■□□□ 1.27
UBE2O-202ENST00000586409 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
UBE2O-202ENST00000586409 IGF1RP08069 1367 aa22.91■■□□□ 1.26
UBE2O-202ENST00000586409 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
UBE2O-202ENST00000586409 CUX2O14529 1486 aa22.9■■□□□ 1.26
UBE2O-202ENST00000586409 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
UBE2O-202ENST00000586409 NESP48681 1621 aa22.89■■□□□ 1.25
UBE2O-202ENST00000586409 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
UBE2O-202ENST00000586409 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
UBE2O-202ENST00000586409 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
UBE2O-202ENST00000586409 ARHGAP35Q9NRY4 1499 aa22.83■■□□□ 1.25
UBE2O-202ENST00000586409 APLP2Q06481 763 aa22.77■■□□□ 1.24
UBE2O-202ENST00000586409 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms