RNA–Protein interactions for RNA: ENST00000586332.5

SPPL2B-203, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 3

Gene SPPL2B, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-203ENST00000586332 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
SPPL2B-203ENST00000586332 ABCC9O60706 1549 aa35.25■■■■□ 3.23
SPPL2B-203ENST00000586332 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
SPPL2B-203ENST00000586332 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
SPPL2B-203ENST00000586332 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
SPPL2B-203ENST00000586332 NACADO15069 1562 aa33.31■■■□□ 2.92
SPPL2B-203ENST00000586332 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
SPPL2B-203ENST00000586332 PABPN1Q86U42 306 aaKnown RBP eCLIP32.86■■■□□ 2.85
SPPL2B-203ENST00000586332 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
SPPL2B-203ENST00000586332 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
SPPL2B-203ENST00000586332 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
SPPL2B-203ENST00000586332 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
SPPL2B-203ENST00000586332 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
SPPL2B-203ENST00000586332 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
SPPL2B-203ENST00000586332 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
SPPL2B-203ENST00000586332 CC2D2AQ9P2K1 1620 aa31.81■■■□□ 2.68
SPPL2B-203ENST00000586332 EIF4G1Q04637 1599 aaKnown RBP31.74■■■□□ 2.67
SPPL2B-203ENST00000586332 CECR2Q9BXF3 1484 aa31.74■■■□□ 2.67
SPPL2B-203ENST00000586332 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
SPPL2B-203ENST00000586332 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
SPPL2B-203ENST00000586332 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
SPPL2B-203ENST00000586332 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
SPPL2B-203ENST00000586332 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
SPPL2B-203ENST00000586332 HMGXB3Q12766 1538 aa30.51■■■□□ 2.47
SPPL2B-203ENST00000586332 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
SPPL2B-203ENST00000586332 BAZ1BQ9UIG0 1483 aaKnown RBP30.42■■■□□ 2.46
SPPL2B-203ENST00000586332 CUX2O14529 1486 aa30.32■■■□□ 2.44
SPPL2B-203ENST00000586332 PEG3Q9GZU2 1588 aa30.29■■■□□ 2.44
SPPL2B-203ENST00000586332 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
SPPL2B-203ENST00000586332 NESP48681 1621 aa30.26■■■□□ 2.44
SPPL2B-203ENST00000586332 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
SPPL2B-203ENST00000586332 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
SPPL2B-203ENST00000586332 WIZO95785 1651 aa29.93■■■□□ 2.38
SPPL2B-203ENST00000586332 PDS5BQ9NTI5 1447 aa29.93■■■□□ 2.38
SPPL2B-203ENST00000586332 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
SPPL2B-203ENST00000586332 KIF21AQ7Z4S6 1674 aa29.88■■■□□ 2.37
SPPL2B-203ENST00000586332 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
SPPL2B-203ENST00000586332 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
SPPL2B-203ENST00000586332 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
SPPL2B-203ENST00000586332 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
SPPL2B-203ENST00000586332 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
SPPL2B-203ENST00000586332 WDR62O43379 1518 aa29.52■■■□□ 2.32
SPPL2B-203ENST00000586332 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
SPPL2B-203ENST00000586332 CFTRP13569 1480 aa29.48■■■□□ 2.31
SPPL2B-203ENST00000586332 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
SPPL2B-203ENST00000586332 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
SPPL2B-203ENST00000586332 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
SPPL2B-203ENST00000586332 SUPT5HO00267 1087 aaKnown RBP29.13■■■□□ 2.25
SPPL2B-203ENST00000586332 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
SPPL2B-203ENST00000586332 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
SPPL2B-203ENST00000586332 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
SPPL2B-203ENST00000586332 IFT140Q96RY7 1462 aa28.94■■■□□ 2.22
SPPL2B-203ENST00000586332 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
SPPL2B-203ENST00000586332 ZNF608Q9ULD9 1512 aaPredicted RBP28.87■■■□□ 2.21
SPPL2B-203ENST00000586332 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
SPPL2B-203ENST00000586332 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
SPPL2B-203ENST00000586332 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.185e-6■■□□□ 14.3
SPPL2B-203ENST00000586332 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
SPPL2B-203ENST00000586332 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
SPPL2B-203ENST00000586332 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
SPPL2B-203ENST00000586332 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SPPL2B-203ENST00000586332 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SPPL2B-203ENST00000586332 FBLN2P98095 1184 aa28.57■■■□□ 2.16
SPPL2B-203ENST00000586332 SOGA1O94964 1423 aa28.56■■■□□ 2.16
SPPL2B-203ENST00000586332 RAD54L2Q9Y4B4 1467 aa28.56■■■□□ 2.16
SPPL2B-203ENST00000586332 CHD1O14646 1710 aa28.51■■■□□ 2.15
SPPL2B-203ENST00000586332 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
SPPL2B-203ENST00000586332 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
SPPL2B-203ENST00000586332 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
SPPL2B-203ENST00000586332 CUX1P39880 1505 aa28.45■■■□□ 2.15
SPPL2B-203ENST00000586332 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
SPPL2B-203ENST00000586332 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
SPPL2B-203ENST00000586332 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
SPPL2B-203ENST00000586332 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
SPPL2B-203ENST00000586332 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
SPPL2B-203ENST00000586332 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
SPPL2B-203ENST00000586332 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
SPPL2B-203ENST00000586332 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
SPPL2B-203ENST00000586332 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
SPPL2B-203ENST00000586332 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
SPPL2B-203ENST00000586332 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
SPPL2B-203ENST00000586332 CLASP1Q7Z460 1538 aa28.14■■■□□ 2.1
SPPL2B-203ENST00000586332 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
SPPL2B-203ENST00000586332 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.09
SPPL2B-203ENST00000586332 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.096e-6■■■□□ 16.7
SPPL2B-203ENST00000586332 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
SPPL2B-203ENST00000586332 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
SPPL2B-203ENST00000586332 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.09
SPPL2B-203ENST00000586332 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
SPPL2B-203ENST00000586332 ADAMTS12P58397 1594 aa27.89■■■□□ 2.05
SPPL2B-203ENST00000586332 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
SPPL2B-203ENST00000586332 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
SPPL2B-203ENST00000586332 CEP170Q5SW79 1584 aa27.78■■■□□ 2.04
SPPL2B-203ENST00000586332 NUP160Q12769 1436 aa27.78■■■□□ 2.04
SPPL2B-203ENST00000586332 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
SPPL2B-203ENST00000586332 SHROOM2Q13796 1616 aa27.63■■■□□ 2.01
SPPL2B-203ENST00000586332 JPH4Q96JJ6 628 aa27.58■■■□□ 2.01
SPPL2B-203ENST00000586332 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2
SPPL2B-203ENST00000586332 KIF27Q86VH2 1401 aa27.53■■■□□ 2
SPPL2B-203ENST00000586332 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms