RNA–Protein interactions for RNA: ENST00000585567.5

SPC24-203, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC24, Length 633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-203ENST00000585567 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
SPC24-203ENST00000585567 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
SPC24-203ENST00000585567 ABCC9O60706 1549 aa33.85■■■■□ 3.01
SPC24-203ENST00000585567 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
SPC24-203ENST00000585567 NACADO15069 1562 aa32.28■■■□□ 2.76
SPC24-203ENST00000585567 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
SPC24-203ENST00000585567 MYO15BQ96JP2 1530 aa32.01■■■□□ 2.72
SPC24-203ENST00000585567 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
SPC24-203ENST00000585567 UNC13AQ9UPW8 1703 aa31.79■■■□□ 2.68
SPC24-203ENST00000585567 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
SPC24-203ENST00000585567 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
SPC24-203ENST00000585567 BICRAQ9NZM4 1560 aa31.54■■■□□ 2.64
SPC24-203ENST00000585567 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
SPC24-203ENST00000585567 SCRIBQ14160 1630 aa31.3■■■□□ 2.6
SPC24-203ENST00000585567 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
SPC24-203ENST00000585567 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
SPC24-203ENST00000585567 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
SPC24-203ENST00000585567 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
SPC24-203ENST00000585567 SMARCA4P51532 1647 aa29.91■■■□□ 2.38
SPC24-203ENST00000585567 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
SPC24-203ENST00000585567 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
SPC24-203ENST00000585567 BAZ1AQ9NRL2 1556 aaPredicted RBP29.78■■■□□ 2.36
SPC24-203ENST00000585567 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
SPC24-203ENST00000585567 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
SPC24-203ENST00000585567 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
SPC24-203ENST00000585567 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
SPC24-203ENST00000585567 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
SPC24-203ENST00000585567 WIZO95785 1651 aa29.32■■■□□ 2.28
SPC24-203ENST00000585567 NESP48681 1621 aa29.26■■■□□ 2.27
SPC24-203ENST00000585567 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
SPC24-203ENST00000585567 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
SPC24-203ENST00000585567 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
SPC24-203ENST00000585567 CUX2O14529 1486 aa28.97■■■□□ 2.23
SPC24-203ENST00000585567 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
SPC24-203ENST00000585567 THOC2Q8NI27 1593 aaKnown RBP28.91■■■□□ 2.22
SPC24-203ENST00000585567 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
SPC24-203ENST00000585567 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.22
SPC24-203ENST00000585567 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
SPC24-203ENST00000585567 CFTRP13569 1480 aa28.71■■■□□ 2.19
SPC24-203ENST00000585567 MRC2Q9UBG0 1479 aa28.61■■■□□ 2.17
SPC24-203ENST00000585567 CCDC88BA6NC98 1476 aa28.6■■■□□ 2.17
SPC24-203ENST00000585567 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
SPC24-203ENST00000585567 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
SPC24-203ENST00000585567 WDR62O43379 1518 aa28.57■■■□□ 2.16
SPC24-203ENST00000585567 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
SPC24-203ENST00000585567 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
SPC24-203ENST00000585567 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
SPC24-203ENST00000585567 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
SPC24-203ENST00000585567 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
SPC24-203ENST00000585567 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
SPC24-203ENST00000585567 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
SPC24-203ENST00000585567 IFT140Q96RY7 1462 aa27.98■■■□□ 2.07
SPC24-203ENST00000585567 ZNF608Q9ULD9 1512 aaPredicted RBP27.96■■■□□ 2.07
SPC24-203ENST00000585567 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
SPC24-203ENST00000585567 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
SPC24-203ENST00000585567 CUX1P39880 1505 aa27.83■■■□□ 2.05
SPC24-203ENST00000585567 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
SPC24-203ENST00000585567 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
SPC24-203ENST00000585567 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
SPC24-203ENST00000585567 AQRO60306 1485 aaKnown RBP eCLIP27.71■■■□□ 2.034e-7■□□□□ 8.6
SPC24-203ENST00000585567 SOGA1O94964 1423 aa27.68■■■□□ 2.02
SPC24-203ENST00000585567 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
SPC24-203ENST00000585567 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
SPC24-203ENST00000585567 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
SPC24-203ENST00000585567 CHD1O14646 1710 aa27.55■■■□□ 2
SPC24-203ENST00000585567 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
SPC24-203ENST00000585567 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
SPC24-203ENST00000585567 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
SPC24-203ENST00000585567 WRNQ14191 1432 aaPredicted RBP eCLIP27.47■■□□□ 1.99
SPC24-203ENST00000585567 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
SPC24-203ENST00000585567 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
SPC24-203ENST00000585567 ABCA5Q8WWZ7 1642 aa27.43■■□□□ 1.98
SPC24-203ENST00000585567 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
SPC24-203ENST00000585567 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
SPC24-203ENST00000585567 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
SPC24-203ENST00000585567 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
SPC24-203ENST00000585567 RIMBP3CA6NJZ7 1639 aa27.37■■□□□ 1.97
SPC24-203ENST00000585567 RIMBP3BA6NNM3 1639 aa27.37■■□□□ 1.97
SPC24-203ENST00000585567 RIMBP3Q9UFD9 1639 aa27.37■■□□□ 1.97
SPC24-203ENST00000585567 ARHGEF11O15085 1522 aa27.32■■□□□ 1.96
SPC24-203ENST00000585567 FBLN2P98095 1184 aa27.32■■□□□ 1.96
SPC24-203ENST00000585567 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
SPC24-203ENST00000585567 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
SPC24-203ENST00000585567 CLASP1Q7Z460 1538 aa27.25■■□□□ 1.95
SPC24-203ENST00000585567 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
SPC24-203ENST00000585567 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
SPC24-203ENST00000585567 ARAP1Q96P48 1450 aa27.11■■□□□ 1.93
SPC24-203ENST00000585567 ERICH3Q5RHP9 1530 aa27.11■■□□□ 1.93
SPC24-203ENST00000585567 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
SPC24-203ENST00000585567 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
SPC24-203ENST00000585567 CEP170Q5SW79 1584 aa27.03■■□□□ 1.92
SPC24-203ENST00000585567 NUP160Q12769 1436 aa27■■□□□ 1.91
SPC24-203ENST00000585567 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
SPC24-203ENST00000585567 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
SPC24-203ENST00000585567 KIF27Q86VH2 1401 aa26.87■■□□□ 1.89
SPC24-203ENST00000585567 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
SPC24-203ENST00000585567 IGF1RP08069 1367 aa26.85■■□□□ 1.89
SPC24-203ENST00000585567 CUL7Q14999 1698 aa26.81■■□□□ 1.88
SPC24-203ENST00000585567 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
SPC24-203ENST00000585567 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms