RNA–Protein interactions for RNA: ENST00000585140.1

ASPSCR1-220, Transcript of ASPSCR1, UBX domain containing tether for SLC2A4, humanhuman

TSL 3

Gene ASPSCR1, Length 447 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASPSCR1-220ENST00000585140 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.51■□□□□ 0.714e-17■■■■■ 149.1
ASPSCR1-220ENST00000585140 SF3B1O75533 1304 aaKnown RBP eCLIP20.48■□□□□ 0.878e-14■■■■■ 114.9
ASPSCR1-220ENST00000585140 SF3B4Q15427 424 aaKnown RBP eCLIP16.93■□□□□ 0.37e-15■■■■■ 49.1
ASPSCR1-220ENST00000585140 GTF2F1P35269 517 aaKnown RBP eCLIP21.08■□□□□ 0.973e-24■■■■■ 45.2
ASPSCR1-220ENST00000585140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.23■■□□□ 1.312e-13■■■■■ 33.3
ASPSCR1-220ENST00000585140 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■■■ 31.4
ASPSCR1-220ENST00000585140 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.036e-8■■■■■ 28.9
ASPSCR1-220ENST00000585140 EFTUD2Q15029 972 aaKnown RBP eCLIP17.16■□□□□ 0.343e-25■■■■■ 28
ASPSCR1-220ENST00000585140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.47■□□□□ 0.875e-24■■■■■ 27.6
ASPSCR1-220ENST00000585140 PRPF4O43172 522 aaKnown RBP eCLIP17.59■□□□□ 0.417e-8■■■■□ 26.6
ASPSCR1-220ENST00000585140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.78■■■□□ 2.521e-6■■■■□ 23.9
ASPSCR1-220ENST00000585140 PCBP2Q15366 365 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■■■■□ 21.6
ASPSCR1-220ENST00000585140 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■■□□ 17.7
ASPSCR1-220ENST00000585140 RBM22Q9NW64 420 aaKnown RBP eCLIP18.35■□□□□ 0.538e-10■■■□□ 16.8
ASPSCR1-220ENST00000585140 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.832e-11■■■□□ 16.5
ASPSCR1-220ENST00000585140 SF3A3Q12874 501 aaKnown RBP eCLIP15.47■□□□□ 0.073e-13■■□□□ 14.4
ASPSCR1-220ENST00000585140 LARP4Q71RC2 724 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■□□□ 13.8
ASPSCR1-220ENST00000585140 PPIGQ13427 754 aaKnown RBP eCLIP21.91■■□□□ 1.11e-23■■□□□ 13.8
ASPSCR1-220ENST00000585140 LSM11P83369 360 aaKnown RBP eCLIP16.17■□□□□ 0.181e-8■■□□□ 13.1
ASPSCR1-220ENST00000585140 PABPC4Q13310 644 aaKnown RBP eCLIP22.71■■□□□ 1.239e-14■■□□□ 13
ASPSCR1-220ENST00000585140 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.354e-6■■□□□ 12.7
ASPSCR1-220ENST00000585140 SMNDC1O75940 238 aaKnown RBP eCLIP16.72■□□□□ 0.272e-12■■□□□ 12.3
ASPSCR1-220ENST00000585140 NKRFO15226 690 aaKnown RBP eCLIP21.73■■□□□ 1.078e-15■□□□□ 11.2
ASPSCR1-220ENST00000585140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.17■□□□□ 0.185e-13■□□□□ 11.2
ASPSCR1-220ENST00000585140 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.92■■□□□ 1.12e-11■□□□□ 10.5
ASPSCR1-220ENST00000585140 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.63■■□□□ 1.212e-34■□□□□ 10
ASPSCR1-220ENST00000585140 G3BP1Q13283 466 aaKnown RBP eCLIP22.82■■□□□ 1.246e-7■□□□□ 9.8
ASPSCR1-220ENST00000585140 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.571e-14■□□□□ 9.6
ASPSCR1-220ENST00000585140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.94■■■□□ 2.223e-11■□□□□ 9.4
ASPSCR1-220ENST00000585140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.652e-15■□□□□ 9.2
ASPSCR1-220ENST00000585140 SRSF1Q07955 248 aaKnown RBP eCLIP18.26■□□□□ 0.514e-16■□□□□ 8.9
ASPSCR1-220ENST00000585140 PCBP1Q15365 356 aaKnown RBP eCLIP20.64■□□□□ 0.894e-13■□□□□ 8.6
ASPSCR1-220ENST00000585140 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■□□□□ 8.6
ASPSCR1-220ENST00000585140 SRSF7Q16629 238 aaKnown RBP eCLIP14.22□□□□□ -0.132e-28■□□□□ 8.4
Retrieved 34 of 34 RNA–protein pairs in 22.8 ms