RNA–Protein interactions for RNA: ENST00000585057.5

RUVBL1-208, Transcript of RuvB like AAA ATPase 1, humanhuman

TSL 3

Gene RUVBL1, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUVBL1-208ENST00000585057 SF3B4Q15427 424 aaKnown RBP eCLIP9.58□□□□□ -0.884e-71■■■■■ 209.9
RUVBL1-208ENST00000585057 SF3A3Q12874 501 aaKnown RBP eCLIP9.62□□□□□ -0.871e-28■■■■■ 138.2
RUVBL1-208ENST00000585057 SF3B1O75533 1304 aaKnown RBP eCLIP11.56□□□□□ -0.566e-7■■■■■ 71.8
RUVBL1-208ENST00000585057 SMNDC1O75940 238 aaKnown RBP eCLIP9.51□□□□□ -0.898e-27■■■■■ 67.3
RUVBL1-208ENST00000585057 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.455e-12■■■■■ 58.5
RUVBL1-208ENST00000585057 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.518e-10■■■■■ 55.6
RUVBL1-208ENST00000585057 NSUN2Q08J23 767 aaKnown RBP eCLIP10.72□□□□□ -0.698e-13■■■■■ 54.9
RUVBL1-208ENST00000585057 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.44□□□□□ -0.426e-9■■■■■ 50.5
RUVBL1-208ENST00000585057 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.123e-11■■■■■ 47
RUVBL1-208ENST00000585057 RBM22Q9NW64 420 aaKnown RBP eCLIP10.71□□□□□ -0.692e-7■■■■□ 22.2
RUVBL1-208ENST00000585057 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■■■□ 21.1
RUVBL1-208ENST00000585057 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.616e-6■■■■□ 19.3
RUVBL1-208ENST00000585057 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■□□ 19.1
RUVBL1-208ENST00000585057 TIA1P31483 386 aaKnown RBP eCLIP9.86□□□□□ -0.831e-13■■■□□ 18.4
RUVBL1-208ENST00000585057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.95□□□□□ -0.661e-6■■□□□ 13.6
RUVBL1-208ENST00000585057 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■■□□□ 11.9
RUVBL1-208ENST00000585057 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.25e-7■■□□□ 11.7
RUVBL1-208ENST00000585057 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.386e-10■□□□□ 9.8
RUVBL1-208ENST00000585057 SND1Q7KZF4 910 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■□□□□ 9.6
Retrieved 19 of 19 RNA–protein pairs in 6.2 ms