RNA–Protein interactions for RNA: ENST00000584289.5

PSMD12-208, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 1 (best)

Gene PSMD12, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-208ENST00000584289 NISCHQ9Y2I1 1504 aa44.28■■■■■ 4.68
PSMD12-208ENST00000584289 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
PSMD12-208ENST00000584289 ABCC9O60706 1549 aa38.71■■■■□ 3.79
PSMD12-208ENST00000584289 ZCCHC6Q5VYS8 1495 aaKnown RBP36.94■■■■□ 3.5
PSMD12-208ENST00000584289 NACADO15069 1562 aa36.91■■■■□ 3.5
PSMD12-208ENST00000584289 RB1CC1Q8TDY2 1594 aa36.89■■■■□ 3.5
PSMD12-208ENST00000584289 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
PSMD12-208ENST00000584289 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
PSMD12-208ENST00000584289 MYO15BQ96JP2 1530 aa36.79■■■■□ 3.48
PSMD12-208ENST00000584289 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
PSMD12-208ENST00000584289 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
PSMD12-208ENST00000584289 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.35
PSMD12-208ENST00000584289 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
PSMD12-208ENST00000584289 BICRAQ9NZM4 1560 aa35.78■■■■□ 3.32
PSMD12-208ENST00000584289 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
PSMD12-208ENST00000584289 CC2D2AQ9P2K1 1620 aa34.92■■■■□ 3.18
PSMD12-208ENST00000584289 CECR2Q9BXF3 1484 aa34.9■■■■□ 3.18
PSMD12-208ENST00000584289 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
PSMD12-208ENST00000584289 SMARCA4P51532 1647 aa34.3■■■■□ 3.08
PSMD12-208ENST00000584289 BAZ1AQ9NRL2 1556 aaPredicted RBP34.3■■■■□ 3.08
PSMD12-208ENST00000584289 DNAJC5Q9H3Z4 198 aa34.18■■■■□ 3.06
PSMD12-208ENST00000584289 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
PSMD12-208ENST00000584289 ATAD2BQ9ULI0 1458 aa34.1■■■■□ 3.05
PSMD12-208ENST00000584289 NCAPD3P42695 1498 aa34.07■■■■□ 3.05
PSMD12-208ENST00000584289 SMARCA2P51531 1590 aa34.06■■■■□ 3.04
PSMD12-208ENST00000584289 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
PSMD12-208ENST00000584289 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
PSMD12-208ENST00000584289 BAZ1BQ9UIG0 1483 aaKnown RBP33.81■■■■□ 3
PSMD12-208ENST00000584289 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
PSMD12-208ENST00000584289 WIZO95785 1651 aa33.71■■■□□ 2.99
PSMD12-208ENST00000584289 CUX2O14529 1486 aa33.52■■■□□ 2.96
PSMD12-208ENST00000584289 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
PSMD12-208ENST00000584289 ERCC6Q03468 1493 aa33.38■■■□□ 2.93
PSMD12-208ENST00000584289 NESP48681 1621 aa33.16■■■□□ 2.9
PSMD12-208ENST00000584289 LAMC3Q9Y6N6 1575 aa33.12■■■□□ 2.89
PSMD12-208ENST00000584289 CADPSQ9ULU8 1353 aa33.07■■■□□ 2.88
PSMD12-208ENST00000584289 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
PSMD12-208ENST00000584289 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
PSMD12-208ENST00000584289 CFTRP13569 1480 aa32.92■■■□□ 2.86
PSMD12-208ENST00000584289 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
PSMD12-208ENST00000584289 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
PSMD12-208ENST00000584289 KIF21AQ7Z4S6 1674 aa32.74■■■□□ 2.83
PSMD12-208ENST00000584289 FANCD2Q9BXW9 1451 aa32.68■■■□□ 2.82
PSMD12-208ENST00000584289 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
PSMD12-208ENST00000584289 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
PSMD12-208ENST00000584289 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
PSMD12-208ENST00000584289 WDR62O43379 1518 aa32.46■■■□□ 2.79
PSMD12-208ENST00000584289 TRIM41Q8WV44 630 aa32.45■■■□□ 2.79
PSMD12-208ENST00000584289 URB2Q14146 1524 aaKnown RBP32.35■■■□□ 2.77
PSMD12-208ENST00000584289 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
PSMD12-208ENST00000584289 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
PSMD12-208ENST00000584289 DNMBPQ6XZF7 1577 aa32.15■■■□□ 2.74
PSMD12-208ENST00000584289 CUX1P39880 1505 aa32■■■□□ 2.71
PSMD12-208ENST00000584289 IFT140Q96RY7 1462 aa31.95■■■□□ 2.7
PSMD12-208ENST00000584289 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
PSMD12-208ENST00000584289 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
PSMD12-208ENST00000584289 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
PSMD12-208ENST00000584289 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
PSMD12-208ENST00000584289 TARBP1Q13395 1621 aaKnown RBP31.82■■■□□ 2.68
PSMD12-208ENST00000584289 SOGA1O94964 1423 aa31.78■■■□□ 2.68
PSMD12-208ENST00000584289 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
PSMD12-208ENST00000584289 TOP2BQ02880 1626 aa31.76■■■□□ 2.67
PSMD12-208ENST00000584289 RAD54L2Q9Y4B4 1467 aa31.76■■■□□ 2.67
PSMD12-208ENST00000584289 SYNJ1O43426 1573 aa31.75■■■□□ 2.67
PSMD12-208ENST00000584289 BIVM-ERCC5R4GMW8 1640 aa31.75■■■□□ 2.67
PSMD12-208ENST00000584289 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.66
PSMD12-208ENST00000584289 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
PSMD12-208ENST00000584289 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
PSMD12-208ENST00000584289 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
PSMD12-208ENST00000584289 AQRO60306 1485 aaKnown RBP eCLIP31.6■■■□□ 2.654e-8■■■■□ 22.7
PSMD12-208ENST00000584289 WDR97A6NE52 1622 aa31.6■■■□□ 2.65
PSMD12-208ENST00000584289 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
PSMD12-208ENST00000584289 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
PSMD12-208ENST00000584289 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
PSMD12-208ENST00000584289 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
PSMD12-208ENST00000584289 GAPVD1Q14C86 1478 aa31.42■■■□□ 2.62
PSMD12-208ENST00000584289 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
PSMD12-208ENST00000584289 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
PSMD12-208ENST00000584289 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
PSMD12-208ENST00000584289 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
PSMD12-208ENST00000584289 CYB5RLQ6IPT4 315 aa31.21■■■□□ 2.59
PSMD12-208ENST00000584289 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
PSMD12-208ENST00000584289 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
PSMD12-208ENST00000584289 CHD1O14646 1710 aa31.18■■■□□ 2.58
PSMD12-208ENST00000584289 KIF27Q86VH2 1401 aa31.17■■■□□ 2.58
PSMD12-208ENST00000584289 FBLN2P98095 1184 aa31.14■■■□□ 2.58
PSMD12-208ENST00000584289 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
PSMD12-208ENST00000584289 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
PSMD12-208ENST00000584289 ADAMTS12P58397 1594 aa31.11■■■□□ 2.57
PSMD12-208ENST00000584289 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.57
PSMD12-208ENST00000584289 IGF1RP08069 1367 aa31.04■■■□□ 2.56
PSMD12-208ENST00000584289 TRHP20396 242 aaPredicted RBP31.01■■■□□ 2.55
PSMD12-208ENST00000584289 GRIN2AQ12879 1464 aa31■■■□□ 2.55
PSMD12-208ENST00000584289 CUL7Q14999 1698 aa30.92■■■□□ 2.54
PSMD12-208ENST00000584289 CLASP1Q7Z460 1538 aa30.92■■■□□ 2.54
PSMD12-208ENST00000584289 CHIC1Q5VXU3 224 aa30.91■■■□□ 2.54
PSMD12-208ENST00000584289 RUSC2Q8N2Y8 1516 aa30.91■■■□□ 2.54
PSMD12-208ENST00000584289 NUP160Q12769 1436 aa30.88■■■□□ 2.53
PSMD12-208ENST00000584289 CARMIL1Q5VZK9 1371 aa30.84■■■□□ 2.53
PSMD12-208ENST00000584289 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms