RNA–Protein interactions for RNA: ENST00000583784.1

RFNG-209, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

Gene RFNG, Length 2,886 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-209ENST00000583784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.81■□□□□ 0.125e-9■■■■■ 125
RFNG-209ENST00000583784 SF3B1O75533 1304 aaKnown RBP eCLIP15.23■□□□□ 0.035e-6■■■■■ 101.3
RFNG-209ENST00000583784 RBM5P52756 815 aaKnown RBP eCLIP16.32■□□□□ 0.24e-8■■■■■ 48.1
RFNG-209ENST00000583784 UPF1Q92900 1129 aaKnown RBP eCLIP15.26■□□□□ 0.035e-9■■■■■ 41.4
RFNG-209ENST00000583784 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.11■□□□□ 0.338e-7■■■■■ 37.5
RFNG-209ENST00000583784 RBFOX2O43251 390 aaKnown RBP eCLIP12.45□□□□□ -0.421e-7■■■■■ 36.7
RFNG-209ENST00000583784 AKAP1Q92667 903 aaKnown RBP eCLIP14.12□□□□□ -0.152e-11■■■■■ 28.6
RFNG-209ENST00000583784 SF3B4Q15427 424 aaKnown RBP eCLIP14.86□□□□□ -0.036e-8■■■■□ 25.2
RFNG-209ENST00000583784 RBM15Q96T37 977 aaKnown RBP eCLIP15.55■□□□□ 0.084e-7■■■■□ 24.4
RFNG-209ENST00000583784 RBM22Q9NW64 420 aaKnown RBP eCLIP14.77□□□□□ -0.053e-7■■■■□ 22.8
RFNG-209ENST00000583784 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.021e-9■■■■□ 22.4
RFNG-209ENST00000583784 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.175e-8■■■■□ 22
RFNG-209ENST00000583784 PPIGQ13427 754 aaKnown RBP eCLIP14.16□□□□□ -0.146e-9■■■□□ 18.8
RFNG-209ENST00000583784 DDX3XO00571 662 aaKnown RBP eCLIP15.82■□□□□ 0.129e-7■■■□□ 18.6
RFNG-209ENST00000583784 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■□□ 17.9
RFNG-209ENST00000583784 LSM11P83369 360 aaKnown RBP eCLIP13.82□□□□□ -0.24e-11■■■□□ 16.2
RFNG-209ENST00000583784 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.467e-8■■■□□ 16
RFNG-209ENST00000583784 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.258e-7■■■□□ 14.9
RFNG-209ENST00000583784 WDR43Q15061 677 aaKnown RBP eCLIP19.34■□□□□ 0.693e-6■■■□□ 14.9
RFNG-209ENST00000583784 PRPF4O43172 522 aaKnown RBP eCLIP15.59■□□□□ 0.094e-8■■□□□ 14.4
RFNG-209ENST00000583784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.174e-12■■□□□ 14.2
RFNG-209ENST00000583784 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■□□□ 14
RFNG-209ENST00000583784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.822e-8■■□□□ 12.9
RFNG-209ENST00000583784 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.79■□□□□ 0.126e-6■■□□□ 12.1
RFNG-209ENST00000583784 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.81■□□□□ 0.121e-13■■□□□ 12.1
RFNG-209ENST00000583784 LARP4Q71RC2 724 aaKnown RBP eCLIP14.7□□□□□ -0.062e-7■■□□□ 11.5
RFNG-209ENST00000583784 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.288e-6■□□□□ 11.3
RFNG-209ENST00000583784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.615e-10■□□□□ 11.3
RFNG-209ENST00000583784 SMNDC1O75940 238 aaKnown RBP eCLIP16.09■□□□□ 0.175e-6■□□□□ 10.8
RFNG-209ENST00000583784 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.382e-8■□□□□ 10.2
RFNG-209ENST00000583784 ZC3H11AO75152 810 aaKnown RBP eCLIP15.55■□□□□ 0.082e-8■□□□□ 10
RFNG-209ENST00000583784 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.68□□□□□ -0.067e-8■□□□□ 10
RFNG-209ENST00000583784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.62■□□□□ 0.092e-9■□□□□ 8.7
RFNG-209ENST00000583784 HLTFQ14527 1009 aaKnown RBP eCLIP16.2■□□□□ 0.185e-7■□□□□ 8.1
Retrieved 34 of 34 RNA–protein pairs in 7.1 ms