RNA–Protein interactions for RNA: ENST00000583458.5

RBFOX3-211, Transcript of RNA binding fox-1 homolog 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RBFOX3, Length 2,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-211ENST00000583458 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
RBFOX3-211ENST00000583458 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
RBFOX3-211ENST00000583458 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
RBFOX3-211ENST00000583458 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
RBFOX3-211ENST00000583458 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
RBFOX3-211ENST00000583458 HRCP23327 699 aa26.12■■□□□ 1.77
RBFOX3-211ENST00000583458 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
RBFOX3-211ENST00000583458 MYO15BQ96JP2 1530 aa26.02■■□□□ 1.76
RBFOX3-211ENST00000583458 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
RBFOX3-211ENST00000583458 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
RBFOX3-211ENST00000583458 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
RBFOX3-211ENST00000583458 ABCC9O60706 1549 aa25.43■■□□□ 1.66
RBFOX3-211ENST00000583458 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
RBFOX3-211ENST00000583458 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
RBFOX3-211ENST00000583458 SCRIBQ14160 1630 aa25.03■■□□□ 1.6
RBFOX3-211ENST00000583458 TRIM26Q12899 539 aaPredicted RBP25.02■■□□□ 1.6
RBFOX3-211ENST00000583458 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
RBFOX3-211ENST00000583458 NACADO15069 1562 aa24.58■■□□□ 1.52
RBFOX3-211ENST00000583458 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
RBFOX3-211ENST00000583458 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
RBFOX3-211ENST00000583458 PELP1Q8IZL8 1130 aaKnown RBP24.5■■□□□ 1.51
RBFOX3-211ENST00000583458 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
RBFOX3-211ENST00000583458 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
RBFOX3-211ENST00000583458 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
RBFOX3-211ENST00000583458 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
RBFOX3-211ENST00000583458 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
RBFOX3-211ENST00000583458 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
RBFOX3-211ENST00000583458 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
RBFOX3-211ENST00000583458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
RBFOX3-211ENST00000583458 WIZO95785 1651 aa24.05■■□□□ 1.44
RBFOX3-211ENST00000583458 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
RBFOX3-211ENST00000583458 NEUROD1Q13562 356 aa24.01■■□□□ 1.43
RBFOX3-211ENST00000583458 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
RBFOX3-211ENST00000583458 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
RBFOX3-211ENST00000583458 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
RBFOX3-211ENST00000583458 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
RBFOX3-211ENST00000583458 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
RBFOX3-211ENST00000583458 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
RBFOX3-211ENST00000583458 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
RBFOX3-211ENST00000583458 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
RBFOX3-211ENST00000583458 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
RBFOX3-211ENST00000583458 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
RBFOX3-211ENST00000583458 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
RBFOX3-211ENST00000583458 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
RBFOX3-211ENST00000583458 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
RBFOX3-211ENST00000583458 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
RBFOX3-211ENST00000583458 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
RBFOX3-211ENST00000583458 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
RBFOX3-211ENST00000583458 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
RBFOX3-211ENST00000583458 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
RBFOX3-211ENST00000583458 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
RBFOX3-211ENST00000583458 MYT1Q01538 1121 aa23.37■■□□□ 1.33
RBFOX3-211ENST00000583458 SOGA1O94964 1423 aa23.35■■□□□ 1.33
RBFOX3-211ENST00000583458 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
RBFOX3-211ENST00000583458 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
RBFOX3-211ENST00000583458 MIER1Q8N108 512 aa23.28■■□□□ 1.32
RBFOX3-211ENST00000583458 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
RBFOX3-211ENST00000583458 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
RBFOX3-211ENST00000583458 RUSC2Q8N2Y8 1516 aa23.24■■□□□ 1.31
RBFOX3-211ENST00000583458 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
RBFOX3-211ENST00000583458 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
RBFOX3-211ENST00000583458 RANGAP1P46060 587 aaPredicted RBP23.12■■□□□ 1.29
RBFOX3-211ENST00000583458 EEA1Q15075 1411 aa23.08■■□□□ 1.28
RBFOX3-211ENST00000583458 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
RBFOX3-211ENST00000583458 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
RBFOX3-211ENST00000583458 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
RBFOX3-211ENST00000583458 CLIP1P30622 1438 aa22.88■■□□□ 1.25
RBFOX3-211ENST00000583458 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
RBFOX3-211ENST00000583458 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
RBFOX3-211ENST00000583458 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
RBFOX3-211ENST00000583458 APLP2Q06481 763 aa22.78■■□□□ 1.24
RBFOX3-211ENST00000583458 KIF21BO75037 1637 aa22.78■■□□□ 1.24
RBFOX3-211ENST00000583458 SUPT16HQ9Y5B9 1047 aaKnown RBP22.76■■□□□ 1.23
RBFOX3-211ENST00000583458 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
RBFOX3-211ENST00000583458 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
RBFOX3-211ENST00000583458 DHX57Q6P158 1386 aaKnown RBP22.68■■□□□ 1.22
RBFOX3-211ENST00000583458 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
RBFOX3-211ENST00000583458 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
RBFOX3-211ENST00000583458 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
RBFOX3-211ENST00000583458 TSHZ2Q9NRE2 1034 aa22.58■■□□□ 1.2
RBFOX3-211ENST00000583458 CFTRP13569 1480 aa22.57■■□□□ 1.2
RBFOX3-211ENST00000583458 CUX1P39880 1505 aa22.55■■□□□ 1.2
RBFOX3-211ENST00000583458 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
RBFOX3-211ENST00000583458 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
RBFOX3-211ENST00000583458 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
RBFOX3-211ENST00000583458 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
RBFOX3-211ENST00000583458 NESP48681 1621 aa22.47■■□□□ 1.19
RBFOX3-211ENST00000583458 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
RBFOX3-211ENST00000583458 ANP32EQ9BTT0 268 aa22.39■■□□□ 1.18
RBFOX3-211ENST00000583458 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
RBFOX3-211ENST00000583458 RRBP1Q9P2E9 1410 aaKnown RBP22.37■■□□□ 1.17
RBFOX3-211ENST00000583458 BCANQ96GW7 911 aa22.36■■□□□ 1.17
RBFOX3-211ENST00000583458 ITGAEP38570 1179 aa22.36■■□□□ 1.17
RBFOX3-211ENST00000583458 CUX2O14529 1486 aa22.36■■□□□ 1.17
RBFOX3-211ENST00000583458 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.16
RBFOX3-211ENST00000583458 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
RBFOX3-211ENST00000583458 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
RBFOX3-211ENST00000583458 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
RBFOX3-211ENST00000583458 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
RBFOX3-211ENST00000583458 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms