RNA–Protein interactions for RNA: ENST00000583378.5

NFE2L1-218, Transcript of nuclear factor, erythroid 2 like 1, humanhuman

TSL 5 BASIC

Gene NFE2L1, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE2L1-218ENST00000583378 SF3A3Q12874 501 aaKnown RBP eCLIP14.71□□□□□ -0.056e-15■■■■■ 98.8
NFE2L1-218ENST00000583378 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.023e-23■■■■■ 97.4
NFE2L1-218ENST00000583378 SF3B1O75533 1304 aaKnown RBP eCLIP14.46□□□□□ -0.093e-6■■■■■ 66.1
NFE2L1-218ENST00000583378 AKAP1Q92667 903 aaKnown RBP eCLIP12.98□□□□□ -0.331e-20■■■■■ 41.9
NFE2L1-218ENST00000583378 PRPF4O43172 522 aaKnown RBP eCLIP14.81□□□□□ -0.048e-7■■■■■ 36
NFE2L1-218ENST00000583378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.012e-11■■■■■ 35.6
NFE2L1-218ENST00000583378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.42■□□□□ 0.062e-7■■■■■ 32.7
NFE2L1-218ENST00000583378 PCBP1Q15365 356 aaKnown RBP eCLIP14.79□□□□□ -0.049e-8■■■■■ 29.3
NFE2L1-218ENST00000583378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.11□□□□□ -0.311e-7■■■■■ 29.2
NFE2L1-218ENST00000583378 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.955e-10■■■■■ 28.8
NFE2L1-218ENST00000583378 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.248e-12■■■■■ 28.7
NFE2L1-218ENST00000583378 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.543e-8■■■■■ 28.7
NFE2L1-218ENST00000583378 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.23e-6■■■■□ 21
NFE2L1-218ENST00000583378 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■■□ 20.6
NFE2L1-218ENST00000583378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.033e-8■■■■□ 19.3
NFE2L1-218ENST00000583378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■■□□ 18.7
NFE2L1-218ENST00000583378 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.47□□□□□ -0.251e-20■■■□□ 18.7
NFE2L1-218ENST00000583378 RPS3P23396 243 aaKnown RBP eCLIP13.86□□□□□ -0.193e-8■■■□□ 16.9
NFE2L1-218ENST00000583378 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.95■□□□□ 0.149e-7■■■□□ 16.5
NFE2L1-218ENST00000583378 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.044e-7■■■□□ 15.8
NFE2L1-218ENST00000583378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.55□□□□□ -0.086e-8■■■□□ 15.1
NFE2L1-218ENST00000583378 RBM15Q96T37 977 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■□□ 14.8
NFE2L1-218ENST00000583378 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■■□□□ 14.4
NFE2L1-218ENST00000583378 DDX6P26196 483 aaKnown RBP eCLIP13.84□□□□□ -0.193e-6■■□□□ 14.2
NFE2L1-218ENST00000583378 DDX3XO00571 662 aaKnown RBP eCLIP15.24■□□□□ 0.031e-7■■□□□ 13.9
NFE2L1-218ENST00000583378 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.044e-6■■□□□ 13.5
NFE2L1-218ENST00000583378 SND1Q7KZF4 910 aaKnown RBP eCLIP15.4■□□□□ 0.068e-12■■□□□ 13.4
NFE2L1-218ENST00000583378 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.269e-8■■□□□ 12.9
NFE2L1-218ENST00000583378 EFTUD2Q15029 972 aaKnown RBP eCLIP14.59□□□□□ -0.077e-6■■□□□ 12.7
NFE2L1-218ENST00000583378 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■■□□□ 12.6
NFE2L1-218ENST00000583378 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.244e-13■■□□□ 12.1
NFE2L1-218ENST00000583378 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■□□□ 11.4
NFE2L1-218ENST00000583378 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■□□□□ 10.9
NFE2L1-218ENST00000583378 CDC40O60508 579 aaKnown RBP eCLIP12.71□□□□□ -0.374e-7■□□□□ 10.6
NFE2L1-218ENST00000583378 TAF15Q92804 592 aaKnown RBP eCLIP11.8□□□□□ -0.529e-8■□□□□ 10.4
NFE2L1-218ENST00000583378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■□□□□ 10.2
NFE2L1-218ENST00000583378 YBX3P16989 372 aaKnown RBP eCLIP15.04■□□□□ -02e-6■□□□□ 9.7
NFE2L1-218ENST00000583378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■□□□□ 9.6
NFE2L1-218ENST00000583378 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.31e-8■□□□□ 9.6
NFE2L1-218ENST00000583378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.163e-7■□□□□ 9.1
Retrieved 40 of 40 RNA–protein pairs in 9.3 ms