RNA–Protein interactions for RNA: ENST00000582736.1

RPL23A-209, Transcript of ribosomal protein L23a, humanhuman

TSL 1 (best)

Gene RPL23A, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-209ENST00000582736 WDR43Q15061 677 aaKnown RBP eCLIP18.95■□□□□ 0.621e-323■□□□□ 10.7
RPL23A-209ENST00000582736 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.511e-323■■■□□ 17
RPL23A-209ENST00000582736 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.461e-323■■■■■ 60.9
RPL23A-209ENST00000582736 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.131e-323■■■■■ 269.4
RPL23A-209ENST00000582736 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.42□□□□□ -0.11e-323■■■■□ 22.8
RPL23A-209ENST00000582736 SMNDC1O75940 238 aaKnown RBP eCLIP13.2□□□□□ -0.31e-323■■■■□ 23.5
RPL23A-209ENST00000582736 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.98□□□□□ -0.331e-323■■■□□ 18.1
RPL23A-209ENST00000582736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.28■□□□□ 0.041e-86■■□□□ 13
RPL23A-209ENST00000582736 DKC1O60832 514 aaKnown RBP eCLIP16.18■□□□□ 0.181e-75■■■■■ 38.5
RPL23A-209ENST00000582736 TRA2AQ13595 282 aaKnown RBP eCLIP14.68□□□□□ -0.069e-73■□□□□ 9.4
RPL23A-209ENST00000582736 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.391e-63■□□□□ 10.2
RPL23A-209ENST00000582736 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.28□□□□□ -0.289e-62■■■□□ 16.5
RPL23A-209ENST00000582736 PTBP1P26599 531 aaKnown RBP eCLIP10.87□□□□□ -0.675e-54■■■■□ 26.1
RPL23A-209ENST00000582736 SF3B4Q15427 424 aaKnown RBP eCLIP13.31□□□□□ -0.286e-46■■■■■ 27.9
RPL23A-209ENST00000582736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.441e-45■■□□□ 12.3
RPL23A-209ENST00000582736 AARSP49588 968 aaKnown RBP eCLIP15.85■□□□□ 0.136e-43■■□□□ 12.8
RPL23A-209ENST00000582736 NIP7Q9Y221 180 aaKnown RBP eCLIP19.74■□□□□ 0.753e-40■■■■■ 46.7
RPL23A-209ENST00000582736 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.93□□□□□ -0.022e-39■■□□□ 14.5
RPL23A-209ENST00000582736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.09■■□□□ 1.612e-32■■□□□ 12.2
RPL23A-209ENST00000582736 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.57■□□□□ 0.562e-24■■■□□ 16.6
RPL23A-209ENST00000582736 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.273e-24■■■■■ 30.1
RPL23A-209ENST00000582736 XRCC6P12956 609 aaKnown RBP eCLIP16.02■□□□□ 0.169e-23■■■□□ 15.2
RPL23A-209ENST00000582736 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.98□□□□□ -0.179e-22■■□□□ 11.5
RPL23A-209ENST00000582736 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.271e-17■□□□□ 10
RPL23A-209ENST00000582736 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.53□□□□□ -0.081e-14■■■■■ 54.7
RPL23A-209ENST00000582736 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.05□□□□□ -0.168e-13■■□□□ 12.7
RPL23A-209ENST00000582736 AQRO60306 1485 aaKnown RBP eCLIP27.99■■■□□ 2.073e-12■■■■■ 36.1
RPL23A-209ENST00000582736 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.284e-12■■□□□ 11.9
RPL23A-209ENST00000582736 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.461e-11■■■□□ 16.2
RPL23A-209ENST00000582736 SLBPQ14493 270 aaKnown RBP eCLIP13.49□□□□□ -0.257e-9■□□□□ 9.4
RPL23A-209ENST00000582736 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.244e-8■□□□□ 8.8
RPL23A-209ENST00000582736 RBM22Q9NW64 420 aaKnown RBP eCLIP14.39□□□□□ -0.115e-8■■■□□ 15.4
RPL23A-209ENST00000582736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.2■□□□□ 0.53e-7■■□□□ 13.9
RPL23A-209ENST00000582736 RBM15Q96T37 977 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■□□□□ 10.5
RPL23A-209ENST00000582736 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.122e-6■■■■■ 43.1
RPL23A-209ENST00000582736 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.463e-6■□□□□ 9.2
RPL23A-209ENST00000582736 NCBP2P52298 156 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■□□□□ 9.3
RPL23A-209ENST00000582736 ZRANB2O95218 330 aaKnown RBP eCLIP14.05□□□□□ -0.164e-6■■□□□ 11.4
RPL23A-209ENST00000582736 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.52□□□□□ -0.257e-6■■■□□ 16.3
Retrieved 39 of 39 RNA–protein pairs in 19.5 ms