RNA–Protein interactions for RNA: ENST00000582467.1

BPTF-216, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 1,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-216ENST00000582467 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
BPTF-216ENST00000582467 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
BPTF-216ENST00000582467 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
BPTF-216ENST00000582467 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
BPTF-216ENST00000582467 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
BPTF-216ENST00000582467 FOXD1Q16676 465 aa19.48■□□□□ 0.71
BPTF-216ENST00000582467 ADRA2BP18089 450 aa19.05■□□□□ 0.64
BPTF-216ENST00000582467 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
BPTF-216ENST00000582467 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
BPTF-216ENST00000582467 KCNA4P22459 653 aa17.92■□□□□ 0.46
BPTF-216ENST00000582467 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
BPTF-216ENST00000582467 MSH5O43196 834 aa17.89■□□□□ 0.45
BPTF-216ENST00000582467 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
BPTF-216ENST00000582467 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
BPTF-216ENST00000582467 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
BPTF-216ENST00000582467 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
BPTF-216ENST00000582467 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
BPTF-216ENST00000582467 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
BPTF-216ENST00000582467 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
BPTF-216ENST00000582467 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
BPTF-216ENST00000582467 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
BPTF-216ENST00000582467 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
BPTF-216ENST00000582467 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
BPTF-216ENST00000582467 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
BPTF-216ENST00000582467 ZBTB22O15209 634 aa16.46■□□□□ 0.23
BPTF-216ENST00000582467 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
BPTF-216ENST00000582467 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
BPTF-216ENST00000582467 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
BPTF-216ENST00000582467 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
BPTF-216ENST00000582467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■□□□ 14.5
BPTF-216ENST00000582467 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
BPTF-216ENST00000582467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
BPTF-216ENST00000582467 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
BPTF-216ENST00000582467 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
BPTF-216ENST00000582467 SAMD1Q6SPF0 538 aaPredicted RBP15.67■□□□□ 0.1
BPTF-216ENST00000582467 APLP2Q06481 763 aa15.5■□□□□ 0.07
BPTF-216ENST00000582467 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
BPTF-216ENST00000582467 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
BPTF-216ENST00000582467 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
BPTF-216ENST00000582467 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
BPTF-216ENST00000582467 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
BPTF-216ENST00000582467 FKBP8Q14318 412 aa15.12■□□□□ 0.01
BPTF-216ENST00000582467 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
BPTF-216ENST00000582467 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
BPTF-216ENST00000582467 CAPN15O75808 1086 aa15.08■□□□□ 0
BPTF-216ENST00000582467 POLA2Q14181 598 aa14.95□□□□□ -0.02
BPTF-216ENST00000582467 FBLN2P98095 1184 aa14.9□□□□□ -0.02
BPTF-216ENST00000582467 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
BPTF-216ENST00000582467 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
BPTF-216ENST00000582467 ABCB7O75027 752 aa14.78□□□□□ -0.04
BPTF-216ENST00000582467 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
BPTF-216ENST00000582467 DSG3P32926 999 aa14.71□□□□□ -0.05
BPTF-216ENST00000582467 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
BPTF-216ENST00000582467 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
BPTF-216ENST00000582467 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
BPTF-216ENST00000582467 PROM2Q8N271 834 aa14.55□□□□□ -0.08
BPTF-216ENST00000582467 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
BPTF-216ENST00000582467 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
BPTF-216ENST00000582467 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
BPTF-216ENST00000582467 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
BPTF-216ENST00000582467 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
BPTF-216ENST00000582467 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
BPTF-216ENST00000582467 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
BPTF-216ENST00000582467 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
BPTF-216ENST00000582467 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
BPTF-216ENST00000582467 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
BPTF-216ENST00000582467 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
BPTF-216ENST00000582467 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
BPTF-216ENST00000582467 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
BPTF-216ENST00000582467 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
BPTF-216ENST00000582467 AKT1S1Q96B36 256 aa13.97□□□□□ -0.17
BPTF-216ENST00000582467 MIER1Q8N108 512 aa13.95□□□□□ -0.18
BPTF-216ENST00000582467 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
BPTF-216ENST00000582467 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
BPTF-216ENST00000582467 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
BPTF-216ENST00000582467 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
BPTF-216ENST00000582467 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
BPTF-216ENST00000582467 PKD2Q13563 968 aa13.77□□□□□ -0.21
BPTF-216ENST00000582467 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
BPTF-216ENST00000582467 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
BPTF-216ENST00000582467 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
BPTF-216ENST00000582467 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
BPTF-216ENST00000582467 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
BPTF-216ENST00000582467 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
BPTF-216ENST00000582467 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
BPTF-216ENST00000582467 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
BPTF-216ENST00000582467 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
BPTF-216ENST00000582467 GSE1Q14687 1217 aa13.54□□□□□ -0.24
BPTF-216ENST00000582467 NUBP1P53384 320 aa13.52□□□□□ -0.25
BPTF-216ENST00000582467 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
BPTF-216ENST00000582467 RGL2O15211 777 aa13.47□□□□□ -0.25
BPTF-216ENST00000582467 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
BPTF-216ENST00000582467 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
BPTF-216ENST00000582467 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
BPTF-216ENST00000582467 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
BPTF-216ENST00000582467 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
BPTF-216ENST00000582467 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
BPTF-216ENST00000582467 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
BPTF-216ENST00000582467 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
BPTF-216ENST00000582467 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms