RNA–Protein interactions for RNA: ENST00000581978.2

RN7SL220P-201, Transcript of RNA, 7SL, cytoplasmic 220, pseudogene, humanhuman

BASIC

Gene RN7SL220P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL220P-201ENST00000581978 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
RN7SL220P-201ENST00000581978 ABCC9O60706 1549 aa24.17■■□□□ 1.46
RN7SL220P-201ENST00000581978 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
RN7SL220P-201ENST00000581978 DNAJC5BQ9UF47 199 aa23.43■■□□□ 1.34
RN7SL220P-201ENST00000581978 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
RN7SL220P-201ENST00000581978 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
RN7SL220P-201ENST00000581978 NACADO15069 1562 aa22.4■■□□□ 1.18
RN7SL220P-201ENST00000581978 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
RN7SL220P-201ENST00000581978 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
RN7SL220P-201ENST00000581978 BICRAQ9NZM4 1560 aa22.1■■□□□ 1.13
RN7SL220P-201ENST00000581978 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
RN7SL220P-201ENST00000581978 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
RN7SL220P-201ENST00000581978 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
RN7SL220P-201ENST00000581978 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
RN7SL220P-201ENST00000581978 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
RN7SL220P-201ENST00000581978 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
RN7SL220P-201ENST00000581978 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
RN7SL220P-201ENST00000581978 SCRIBQ14160 1630 aa21.27■■□□□ 1
RN7SL220P-201ENST00000581978 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
RN7SL220P-201ENST00000581978 CUX2O14529 1486 aa21.2■□□□□ 0.98
RN7SL220P-201ENST00000581978 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
RN7SL220P-201ENST00000581978 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
RN7SL220P-201ENST00000581978 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
RN7SL220P-201ENST00000581978 NESP48681 1621 aa20.56■□□□□ 0.88
RN7SL220P-201ENST00000581978 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
RN7SL220P-201ENST00000581978 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
RN7SL220P-201ENST00000581978 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
RN7SL220P-201ENST00000581978 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
RN7SL220P-201ENST00000581978 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.84
RN7SL220P-201ENST00000581978 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
RN7SL220P-201ENST00000581978 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
RN7SL220P-201ENST00000581978 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
RN7SL220P-201ENST00000581978 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
RN7SL220P-201ENST00000581978 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
RN7SL220P-201ENST00000581978 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
RN7SL220P-201ENST00000581978 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
RN7SL220P-201ENST00000581978 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
RN7SL220P-201ENST00000581978 WDR62O43379 1518 aa20.07■□□□□ 0.8
RN7SL220P-201ENST00000581978 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
RN7SL220P-201ENST00000581978 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
RN7SL220P-201ENST00000581978 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
RN7SL220P-201ENST00000581978 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
RN7SL220P-201ENST00000581978 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
RN7SL220P-201ENST00000581978 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
RN7SL220P-201ENST00000581978 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
RN7SL220P-201ENST00000581978 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
RN7SL220P-201ENST00000581978 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
RN7SL220P-201ENST00000581978 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
RN7SL220P-201ENST00000581978 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
RN7SL220P-201ENST00000581978 CFTRP13569 1480 aa19.65■□□□□ 0.74
RN7SL220P-201ENST00000581978 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
RN7SL220P-201ENST00000581978 WIZO95785 1651 aa19.56■□□□□ 0.72
RN7SL220P-201ENST00000581978 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
RN7SL220P-201ENST00000581978 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
RN7SL220P-201ENST00000581978 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
RN7SL220P-201ENST00000581978 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
RN7SL220P-201ENST00000581978 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
RN7SL220P-201ENST00000581978 CHD1O14646 1710 aa19.35■□□□□ 0.69
RN7SL220P-201ENST00000581978 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
RN7SL220P-201ENST00000581978 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
RN7SL220P-201ENST00000581978 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
RN7SL220P-201ENST00000581978 ABCC8Q09428 1581 aa19.27■□□□□ 0.67
RN7SL220P-201ENST00000581978 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.67
RN7SL220P-201ENST00000581978 FBLN2P98095 1184 aa19.25■□□□□ 0.67
RN7SL220P-201ENST00000581978 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
RN7SL220P-201ENST00000581978 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
RN7SL220P-201ENST00000581978 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
RN7SL220P-201ENST00000581978 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
RN7SL220P-201ENST00000581978 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
RN7SL220P-201ENST00000581978 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
RN7SL220P-201ENST00000581978 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
RN7SL220P-201ENST00000581978 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
RN7SL220P-201ENST00000581978 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.63
RN7SL220P-201ENST00000581978 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
RN7SL220P-201ENST00000581978 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
RN7SL220P-201ENST00000581978 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
RN7SL220P-201ENST00000581978 SOGA1O94964 1423 aa18.98■□□□□ 0.63
RN7SL220P-201ENST00000581978 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
RN7SL220P-201ENST00000581978 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
RN7SL220P-201ENST00000581978 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
RN7SL220P-201ENST00000581978 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
RN7SL220P-201ENST00000581978 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
RN7SL220P-201ENST00000581978 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
RN7SL220P-201ENST00000581978 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
RN7SL220P-201ENST00000581978 KDM4FA0A1W2PPD8 638 aa18.76■□□□□ 0.59
RN7SL220P-201ENST00000581978 PBRM1Q86U86 1689 aa18.71■□□□□ 0.59
RN7SL220P-201ENST00000581978 CUX1P39880 1505 aa18.69■□□□□ 0.58
RN7SL220P-201ENST00000581978 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
RN7SL220P-201ENST00000581978 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
RN7SL220P-201ENST00000581978 NUP160Q12769 1436 aa18.64■□□□□ 0.57
RN7SL220P-201ENST00000581978 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
RN7SL220P-201ENST00000581978 ABCC10Q5T3U5 1492 aa18.62■□□□□ 0.57
RN7SL220P-201ENST00000581978 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
RN7SL220P-201ENST00000581978 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
RN7SL220P-201ENST00000581978 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
RN7SL220P-201ENST00000581978 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
RN7SL220P-201ENST00000581978 KDM6BO15054 1643 aa18.52■□□□□ 0.56
RN7SL220P-201ENST00000581978 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
RN7SL220P-201ENST00000581978 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
RN7SL220P-201ENST00000581978 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms