RNA–Protein interactions for RNA: ENST00000581908.1

SUPT6H-207, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-207ENST00000581908 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
SUPT6H-207ENST00000581908 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
SUPT6H-207ENST00000581908 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
SUPT6H-207ENST00000581908 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
SUPT6H-207ENST00000581908 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
SUPT6H-207ENST00000581908 SHROOM4Q9ULL8 1493 aa12.63□□□□□ -0.39
SUPT6H-207ENST00000581908 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
SUPT6H-207ENST00000581908 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
SUPT6H-207ENST00000581908 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
SUPT6H-207ENST00000581908 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
SUPT6H-207ENST00000581908 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
SUPT6H-207ENST00000581908 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
SUPT6H-207ENST00000581908 ABCC9O60706 1549 aa12.16□□□□□ -0.46
SUPT6H-207ENST00000581908 SCRIBQ14160 1630 aa12.05□□□□□ -0.48
SUPT6H-207ENST00000581908 NACADO15069 1562 aa12.05□□□□□ -0.48
SUPT6H-207ENST00000581908 RB1CC1Q8TDY2 1594 aa11.9□□□□□ -0.5
SUPT6H-207ENST00000581908 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
SUPT6H-207ENST00000581908 HRCP23327 699 aa11.73□□□□□ -0.53
SUPT6H-207ENST00000581908 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
SUPT6H-207ENST00000581908 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
SUPT6H-207ENST00000581908 WIZO95785 1651 aa11.68□□□□□ -0.54
SUPT6H-207ENST00000581908 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
SUPT6H-207ENST00000581908 CECR2Q9BXF3 1484 aa11.67□□□□□ -0.54
SUPT6H-207ENST00000581908 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
SUPT6H-207ENST00000581908 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
SUPT6H-207ENST00000581908 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
SUPT6H-207ENST00000581908 SMARCA4P51532 1647 aa11.6□□□□□ -0.55
SUPT6H-207ENST00000581908 TOP2AP11388 1531 aaKnown RBP11.59□□□□□ -0.55
SUPT6H-207ENST00000581908 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.55
SUPT6H-207ENST00000581908 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
SUPT6H-207ENST00000581908 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
SUPT6H-207ENST00000581908 FOXD1Q16676 465 aa11.47□□□□□ -0.57
SUPT6H-207ENST00000581908 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
SUPT6H-207ENST00000581908 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
SUPT6H-207ENST00000581908 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
SUPT6H-207ENST00000581908 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
SUPT6H-207ENST00000581908 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
SUPT6H-207ENST00000581908 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
SUPT6H-207ENST00000581908 EEA1Q15075 1411 aa11.37□□□□□ -0.59
SUPT6H-207ENST00000581908 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
SUPT6H-207ENST00000581908 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
SUPT6H-207ENST00000581908 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.61
SUPT6H-207ENST00000581908 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
SUPT6H-207ENST00000581908 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
SUPT6H-207ENST00000581908 KIF21BO75037 1637 aa11.22□□□□□ -0.61
SUPT6H-207ENST00000581908 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
SUPT6H-207ENST00000581908 ATAD2BQ9ULI0 1458 aa11.22□□□□□ -0.61
SUPT6H-207ENST00000581908 CEP162Q5TB80 1403 aa11.21□□□□□ -0.61
SUPT6H-207ENST00000581908 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
SUPT6H-207ENST00000581908 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SUPT6H-207ENST00000581908 SOGA1O94964 1423 aa11.18□□□□□ -0.62
SUPT6H-207ENST00000581908 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
SUPT6H-207ENST00000581908 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
SUPT6H-207ENST00000581908 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
SUPT6H-207ENST00000581908 BIVM-ERCC5R4GMW8 1640 aa11.14□□□□□ -0.63
SUPT6H-207ENST00000581908 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
SUPT6H-207ENST00000581908 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
SUPT6H-207ENST00000581908 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
SUPT6H-207ENST00000581908 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
SUPT6H-207ENST00000581908 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
SUPT6H-207ENST00000581908 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
SUPT6H-207ENST00000581908 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
SUPT6H-207ENST00000581908 ERICH3Q5RHP9 1530 aa11.04□□□□□ -0.64
SUPT6H-207ENST00000581908 DNAJC5BQ9UF47 199 aa11.03□□□□□ -0.64
SUPT6H-207ENST00000581908 CLIP1P30622 1438 aa11.02□□□□□ -0.64
SUPT6H-207ENST00000581908 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
SUPT6H-207ENST00000581908 ADRA2BP18089 450 aa11□□□□□ -0.65
SUPT6H-207ENST00000581908 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
SUPT6H-207ENST00000581908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
SUPT6H-207ENST00000581908 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
SUPT6H-207ENST00000581908 APLP2Q06481 763 aa10.94□□□□□ -0.66
SUPT6H-207ENST00000581908 CUX1P39880 1505 aa10.93□□□□□ -0.66
SUPT6H-207ENST00000581908 CFTRP13569 1480 aa10.93□□□□□ -0.66
SUPT6H-207ENST00000581908 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
SUPT6H-207ENST00000581908 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
SUPT6H-207ENST00000581908 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
SUPT6H-207ENST00000581908 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
SUPT6H-207ENST00000581908 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.68
SUPT6H-207ENST00000581908 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
SUPT6H-207ENST00000581908 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
SUPT6H-207ENST00000581908 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
SUPT6H-207ENST00000581908 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
SUPT6H-207ENST00000581908 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.68
SUPT6H-207ENST00000581908 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
SUPT6H-207ENST00000581908 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
SUPT6H-207ENST00000581908 CUX2O14529 1486 aa10.76□□□□□ -0.69
SUPT6H-207ENST00000581908 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
SUPT6H-207ENST00000581908 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 DNMBPQ6XZF7 1577 aa10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 CUL7Q14999 1698 aa10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
SUPT6H-207ENST00000581908 CFAP43Q8NDM7 1665 aa10.73□□□□□ -0.69
SUPT6H-207ENST00000581908 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
SUPT6H-207ENST00000581908 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
SUPT6H-207ENST00000581908 CTTNBP2Q8WZ74 1663 aa10.72□□□□□ -0.69
SUPT6H-207ENST00000581908 RANGAP1P46060 587 aaPredicted RBP10.71□□□□□ -0.69
SUPT6H-207ENST00000581908 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.69
SUPT6H-207ENST00000581908 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms