RNA–Protein interactions for RNA: ENST00000581189.1

NDEL1-210, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-210ENST00000581189 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
NDEL1-210ENST00000581189 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
NDEL1-210ENST00000581189 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
NDEL1-210ENST00000581189 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
NDEL1-210ENST00000581189 ABCC9O60706 1549 aa14.06□□□□□ -0.16
NDEL1-210ENST00000581189 NACADO15069 1562 aa13.55□□□□□ -0.24
NDEL1-210ENST00000581189 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
NDEL1-210ENST00000581189 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
NDEL1-210ENST00000581189 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
NDEL1-210ENST00000581189 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
NDEL1-210ENST00000581189 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
NDEL1-210ENST00000581189 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
NDEL1-210ENST00000581189 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
NDEL1-210ENST00000581189 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
NDEL1-210ENST00000581189 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
NDEL1-210ENST00000581189 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-210ENST00000581189 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
NDEL1-210ENST00000581189 SHROOM4Q9ULL8 1493 aa13.02□□□□□ -0.33
NDEL1-210ENST00000581189 DNAJC5BQ9UF47 199 aa12.98□□□□□ -0.33
NDEL1-210ENST00000581189 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
NDEL1-210ENST00000581189 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
NDEL1-210ENST00000581189 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
NDEL1-210ENST00000581189 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
NDEL1-210ENST00000581189 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-210ENST00000581189 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
NDEL1-210ENST00000581189 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
NDEL1-210ENST00000581189 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
NDEL1-210ENST00000581189 PEG3Q9GZU2 1588 aa12.49□□□□□ -0.41
NDEL1-210ENST00000581189 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
NDEL1-210ENST00000581189 FOXD1Q16676 465 aa12.46□□□□□ -0.41
NDEL1-210ENST00000581189 HMGXB3Q12766 1538 aa12.44□□□□□ -0.42
NDEL1-210ENST00000581189 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
NDEL1-210ENST00000581189 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
NDEL1-210ENST00000581189 WIZO95785 1651 aa12.36□□□□□ -0.43
NDEL1-210ENST00000581189 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
NDEL1-210ENST00000581189 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
NDEL1-210ENST00000581189 NESP48681 1621 aa12.2□□□□□ -0.46
NDEL1-210ENST00000581189 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
NDEL1-210ENST00000581189 LAMC3Q9Y6N6 1575 aa12.15□□□□□ -0.46
NDEL1-210ENST00000581189 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
NDEL1-210ENST00000581189 CFTRP13569 1480 aa12.11□□□□□ -0.47
NDEL1-210ENST00000581189 ERCC6Q03468 1493 aa12.08□□□□□ -0.47
NDEL1-210ENST00000581189 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
NDEL1-210ENST00000581189 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
NDEL1-210ENST00000581189 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
NDEL1-210ENST00000581189 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
NDEL1-210ENST00000581189 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
NDEL1-210ENST00000581189 CUX2O14529 1486 aa11.98□□□□□ -0.49
NDEL1-210ENST00000581189 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
NDEL1-210ENST00000581189 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
NDEL1-210ENST00000581189 WDR62O43379 1518 aa11.92□□□□□ -0.5
NDEL1-210ENST00000581189 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
NDEL1-210ENST00000581189 URB2Q14146 1524 aaKnown RBP11.9□□□□□ -0.5
NDEL1-210ENST00000581189 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
NDEL1-210ENST00000581189 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
NDEL1-210ENST00000581189 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
NDEL1-210ENST00000581189 MSH5O43196 834 aa11.79□□□□□ -0.52
NDEL1-210ENST00000581189 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
NDEL1-210ENST00000581189 CUX1P39880 1505 aa11.75□□□□□ -0.53
NDEL1-210ENST00000581189 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
NDEL1-210ENST00000581189 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-210ENST00000581189 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
NDEL1-210ENST00000581189 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
NDEL1-210ENST00000581189 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
NDEL1-210ENST00000581189 RAD54L2Q9Y4B4 1467 aa11.68□□□□□ -0.54
NDEL1-210ENST00000581189 SOGA1O94964 1423 aa11.68□□□□□ -0.54
NDEL1-210ENST00000581189 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
NDEL1-210ENST00000581189 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
NDEL1-210ENST00000581189 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
NDEL1-210ENST00000581189 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
NDEL1-210ENST00000581189 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
NDEL1-210ENST00000581189 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
NDEL1-210ENST00000581189 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
NDEL1-210ENST00000581189 TDRD9Q8NDG6 1382 aaKnown RBP11.61□□□□□ -0.55
NDEL1-210ENST00000581189 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
NDEL1-210ENST00000581189 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
NDEL1-210ENST00000581189 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
NDEL1-210ENST00000581189 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
NDEL1-210ENST00000581189 GRIN2BQ13224 1484 aa11.52□□□□□ -0.56
NDEL1-210ENST00000581189 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
NDEL1-210ENST00000581189 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
NDEL1-210ENST00000581189 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
NDEL1-210ENST00000581189 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
NDEL1-210ENST00000581189 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
NDEL1-210ENST00000581189 ADRA2BP18089 450 aa11.46□□□□□ -0.57
NDEL1-210ENST00000581189 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
NDEL1-210ENST00000581189 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
NDEL1-210ENST00000581189 FBLN2P98095 1184 aa11.44□□□□□ -0.58
NDEL1-210ENST00000581189 CHMP7Q8WUX9 453 aaPredicted RBP11.44□□□□□ -0.58
NDEL1-210ENST00000581189 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
NDEL1-210ENST00000581189 IGF1RP08069 1367 aa11.43□□□□□ -0.58
NDEL1-210ENST00000581189 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
NDEL1-210ENST00000581189 CHD1O14646 1710 aa11.41□□□□□ -0.58
NDEL1-210ENST00000581189 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
NDEL1-210ENST00000581189 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
NDEL1-210ENST00000581189 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
NDEL1-210ENST00000581189 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
NDEL1-210ENST00000581189 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
NDEL1-210ENST00000581189 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
NDEL1-210ENST00000581189 NUP160Q12769 1436 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms