RNA–Protein interactions for RNA: ENST00000580662.5

HELZ-208, Transcript of helicase with zinc finger, humanhuman

TSL 3

Gene HELZ, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELZ-208ENST00000580662 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
HELZ-208ENST00000580662 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
HELZ-208ENST00000580662 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
HELZ-208ENST00000580662 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
HELZ-208ENST00000580662 SENP3Q9H4L4 574 aaPredicted RBP15.81■□□□□ 0.12
HELZ-208ENST00000580662 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
HELZ-208ENST00000580662 FOXD1Q16676 465 aa14.6□□□□□ -0.07
HELZ-208ENST00000580662 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
HELZ-208ENST00000580662 ADRA2BP18089 450 aa14.36□□□□□ -0.11
HELZ-208ENST00000580662 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
HELZ-208ENST00000580662 ABCC9O60706 1549 aa14.06□□□□□ -0.16
HELZ-208ENST00000580662 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
HELZ-208ENST00000580662 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
HELZ-208ENST00000580662 KCNA4P22459 653 aa13.69□□□□□ -0.22
HELZ-208ENST00000580662 NACADO15069 1562 aa13.63□□□□□ -0.23
HELZ-208ENST00000580662 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
HELZ-208ENST00000580662 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
HELZ-208ENST00000580662 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
HELZ-208ENST00000580662 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
HELZ-208ENST00000580662 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
HELZ-208ENST00000580662 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
HELZ-208ENST00000580662 MSH5O43196 834 aa13.32□□□□□ -0.28
HELZ-208ENST00000580662 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
HELZ-208ENST00000580662 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
HELZ-208ENST00000580662 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
HELZ-208ENST00000580662 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
HELZ-208ENST00000580662 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
HELZ-208ENST00000580662 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
HELZ-208ENST00000580662 BICRAQ9NZM4 1560 aa13.14□□□□□ -0.31
HELZ-208ENST00000580662 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
HELZ-208ENST00000580662 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
HELZ-208ENST00000580662 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
HELZ-208ENST00000580662 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
HELZ-208ENST00000580662 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
HELZ-208ENST00000580662 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
HELZ-208ENST00000580662 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
HELZ-208ENST00000580662 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
HELZ-208ENST00000580662 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
HELZ-208ENST00000580662 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
HELZ-208ENST00000580662 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
HELZ-208ENST00000580662 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
HELZ-208ENST00000580662 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
HELZ-208ENST00000580662 ZBTB22O15209 634 aa12.62□□□□□ -0.39
HELZ-208ENST00000580662 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
HELZ-208ENST00000580662 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
HELZ-208ENST00000580662 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
HELZ-208ENST00000580662 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
HELZ-208ENST00000580662 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
HELZ-208ENST00000580662 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
HELZ-208ENST00000580662 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
HELZ-208ENST00000580662 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
HELZ-208ENST00000580662 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
HELZ-208ENST00000580662 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.41
HELZ-208ENST00000580662 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
HELZ-208ENST00000580662 WIZO95785 1651 aa12.37□□□□□ -0.43
HELZ-208ENST00000580662 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
HELZ-208ENST00000580662 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
HELZ-208ENST00000580662 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
HELZ-208ENST00000580662 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
HELZ-208ENST00000580662 ERCC6Q03468 1493 aa12.18□□□□□ -0.46
HELZ-208ENST00000580662 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
HELZ-208ENST00000580662 NESP48681 1621 aa12.16□□□□□ -0.46
HELZ-208ENST00000580662 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
HELZ-208ENST00000580662 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
HELZ-208ENST00000580662 CFTRP13569 1480 aa12.13□□□□□ -0.47
HELZ-208ENST00000580662 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
HELZ-208ENST00000580662 CUX2O14529 1486 aa12.06□□□□□ -0.48
HELZ-208ENST00000580662 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
HELZ-208ENST00000580662 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
HELZ-208ENST00000580662 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
HELZ-208ENST00000580662 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
HELZ-208ENST00000580662 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
HELZ-208ENST00000580662 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
HELZ-208ENST00000580662 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
HELZ-208ENST00000580662 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
HELZ-208ENST00000580662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.52e-8■■■□□ 16.1
HELZ-208ENST00000580662 WDR62O43379 1518 aa11.95□□□□□ -0.5
HELZ-208ENST00000580662 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
HELZ-208ENST00000580662 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
HELZ-208ENST00000580662 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
HELZ-208ENST00000580662 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
HELZ-208ENST00000580662 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
HELZ-208ENST00000580662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
HELZ-208ENST00000580662 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
HELZ-208ENST00000580662 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
HELZ-208ENST00000580662 IFT140Q96RY7 1462 aa11.79□□□□□ -0.52
HELZ-208ENST00000580662 CUX1P39880 1505 aa11.75□□□□□ -0.53
HELZ-208ENST00000580662 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
HELZ-208ENST00000580662 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
HELZ-208ENST00000580662 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
HELZ-208ENST00000580662 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
HELZ-208ENST00000580662 SOGA1O94964 1423 aa11.71□□□□□ -0.53
HELZ-208ENST00000580662 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
HELZ-208ENST00000580662 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
HELZ-208ENST00000580662 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
HELZ-208ENST00000580662 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
HELZ-208ENST00000580662 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
HELZ-208ENST00000580662 RAD54L2Q9Y4B4 1467 aa11.65□□□□□ -0.54
HELZ-208ENST00000580662 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
HELZ-208ENST00000580662 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms