RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 NISCHQ9Y2I1 1504 aa25.87■■□□□ 1.73
NCOR1-220ENST00000580617 CCDC180Q9P1Z9 1646 aa23.17■■□□□ 1.3
NCOR1-220ENST00000580617 ABCC9O60706 1549 aa22.85■■□□□ 1.25
NCOR1-220ENST00000580617 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
NCOR1-220ENST00000580617 NACADO15069 1562 aa21.78■■□□□ 1.08
NCOR1-220ENST00000580617 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
NCOR1-220ENST00000580617 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
NCOR1-220ENST00000580617 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
NCOR1-220ENST00000580617 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
NCOR1-220ENST00000580617 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
NCOR1-220ENST00000580617 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
NCOR1-220ENST00000580617 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
NCOR1-220ENST00000580617 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
NCOR1-220ENST00000580617 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
NCOR1-220ENST00000580617 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
NCOR1-220ENST00000580617 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
NCOR1-220ENST00000580617 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
NCOR1-220ENST00000580617 CECR2Q9BXF3 1484 aa20.55■□□□□ 0.88
NCOR1-220ENST00000580617 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
NCOR1-220ENST00000580617 NCAPD3P42695 1498 aa20.08■□□□□ 0.8
NCOR1-220ENST00000580617 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
NCOR1-220ENST00000580617 BAZ1AQ9NRL2 1556 aaPredicted RBP20.06■□□□□ 0.8
NCOR1-220ENST00000580617 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
NCOR1-220ENST00000580617 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
NCOR1-220ENST00000580617 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
NCOR1-220ENST00000580617 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
NCOR1-220ENST00000580617 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
NCOR1-220ENST00000580617 WIZO95785 1651 aa19.76■□□□□ 0.75
NCOR1-220ENST00000580617 NESP48681 1621 aa19.72■□□□□ 0.75
NCOR1-220ENST00000580617 DNAJC5Q9H3Z4 198 aa19.7■□□□□ 0.74
NCOR1-220ENST00000580617 ERCC6Q03468 1493 aa19.69■□□□□ 0.74
NCOR1-220ENST00000580617 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
NCOR1-220ENST00000580617 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
NCOR1-220ENST00000580617 CUX2O14529 1486 aa19.58■□□□□ 0.73
NCOR1-220ENST00000580617 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
NCOR1-220ENST00000580617 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
NCOR1-220ENST00000580617 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
NCOR1-220ENST00000580617 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
NCOR1-220ENST00000580617 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
NCOR1-220ENST00000580617 CFTRP13569 1480 aa19.33■□□□□ 0.68
NCOR1-220ENST00000580617 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
NCOR1-220ENST00000580617 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
NCOR1-220ENST00000580617 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
NCOR1-220ENST00000580617 WDR62O43379 1518 aa19.27■□□□□ 0.68
NCOR1-220ENST00000580617 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.68
NCOR1-220ENST00000580617 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
NCOR1-220ENST00000580617 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
NCOR1-220ENST00000580617 TOPBP1Q92547 1522 aa18.96■□□□□ 0.62
NCOR1-220ENST00000580617 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
NCOR1-220ENST00000580617 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
NCOR1-220ENST00000580617 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
NCOR1-220ENST00000580617 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
NCOR1-220ENST00000580617 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
NCOR1-220ENST00000580617 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
NCOR1-220ENST00000580617 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
NCOR1-220ENST00000580617 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
NCOR1-220ENST00000580617 CUX1P39880 1505 aa18.73■□□□□ 0.59
NCOR1-220ENST00000580617 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
NCOR1-220ENST00000580617 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
NCOR1-220ENST00000580617 AQRO60306 1485 aaKnown RBP eCLIP18.68■□□□□ 0.58
NCOR1-220ENST00000580617 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
NCOR1-220ENST00000580617 SOGA1O94964 1423 aa18.66■□□□□ 0.58
NCOR1-220ENST00000580617 CHD1O14646 1710 aa18.64■□□□□ 0.57
NCOR1-220ENST00000580617 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
NCOR1-220ENST00000580617 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
NCOR1-220ENST00000580617 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
NCOR1-220ENST00000580617 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
NCOR1-220ENST00000580617 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
NCOR1-220ENST00000580617 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
NCOR1-220ENST00000580617 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
NCOR1-220ENST00000580617 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
NCOR1-220ENST00000580617 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
NCOR1-220ENST00000580617 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
NCOR1-220ENST00000580617 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
NCOR1-220ENST00000580617 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
NCOR1-220ENST00000580617 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
NCOR1-220ENST00000580617 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
NCOR1-220ENST00000580617 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
NCOR1-220ENST00000580617 FBLN2P98095 1184 aa18.46■□□□□ 0.55
NCOR1-220ENST00000580617 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
NCOR1-220ENST00000580617 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
NCOR1-220ENST00000580617 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
NCOR1-220ENST00000580617 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
NCOR1-220ENST00000580617 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
NCOR1-220ENST00000580617 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
NCOR1-220ENST00000580617 ADAMTS12P58397 1594 aa18.32■□□□□ 0.52
NCOR1-220ENST00000580617 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
NCOR1-220ENST00000580617 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
NCOR1-220ENST00000580617 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
NCOR1-220ENST00000580617 CYB5RLQ6IPT4 315 aa18.24■□□□□ 0.51
NCOR1-220ENST00000580617 CEP170Q5SW79 1584 aa18.22■□□□□ 0.51
NCOR1-220ENST00000580617 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
NCOR1-220ENST00000580617 NUP160Q12769 1436 aa18.18■□□□□ 0.5
NCOR1-220ENST00000580617 SHROOM2Q13796 1616 aa18.13■□□□□ 0.49
NCOR1-220ENST00000580617 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
NCOR1-220ENST00000580617 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
NCOR1-220ENST00000580617 CUL7Q14999 1698 aa18.08■□□□□ 0.49
NCOR1-220ENST00000580617 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
NCOR1-220ENST00000580617 IGF1RP08069 1367 aa18.05■□□□□ 0.48
NCOR1-220ENST00000580617 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms