RNA–Protein interactions for RNA: ENST00000580554.1

NCOR1-219, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-219ENST00000580554 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
NCOR1-219ENST00000580554 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
NCOR1-219ENST00000580554 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
NCOR1-219ENST00000580554 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
NCOR1-219ENST00000580554 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
NCOR1-219ENST00000580554 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
NCOR1-219ENST00000580554 FOXD1Q16676 465 aa17.65■□□□□ 0.42
NCOR1-219ENST00000580554 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
NCOR1-219ENST00000580554 ADRA2BP18089 450 aa17.03■□□□□ 0.32
NCOR1-219ENST00000580554 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
NCOR1-219ENST00000580554 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
NCOR1-219ENST00000580554 ABCC9O60706 1549 aa16.34■□□□□ 0.21
NCOR1-219ENST00000580554 MSH5O43196 834 aa16.21■□□□□ 0.19
NCOR1-219ENST00000580554 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
NCOR1-219ENST00000580554 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
NCOR1-219ENST00000580554 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
NCOR1-219ENST00000580554 KCNA4P22459 653 aa15.51■□□□□ 0.07
NCOR1-219ENST00000580554 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
NCOR1-219ENST00000580554 NACADO15069 1562 aa15.47■□□□□ 0.07
NCOR1-219ENST00000580554 MAPK8IP2Q13387 824 aaPredicted RBP15.42■□□□□ 0.06
NCOR1-219ENST00000580554 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
NCOR1-219ENST00000580554 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
NCOR1-219ENST00000580554 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
NCOR1-219ENST00000580554 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
NCOR1-219ENST00000580554 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NCOR1-219ENST00000580554 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
NCOR1-219ENST00000580554 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
NCOR1-219ENST00000580554 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
NCOR1-219ENST00000580554 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
NCOR1-219ENST00000580554 DCAF1Q9Y4B6 1507 aa15.15■□□□□ 0.02
NCOR1-219ENST00000580554 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
NCOR1-219ENST00000580554 SCRIBQ14160 1630 aa15.03■□□□□ -0
NCOR1-219ENST00000580554 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
NCOR1-219ENST00000580554 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
NCOR1-219ENST00000580554 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
NCOR1-219ENST00000580554 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
NCOR1-219ENST00000580554 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
NCOR1-219ENST00000580554 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
NCOR1-219ENST00000580554 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
NCOR1-219ENST00000580554 POTEDQ86YR6 584 aa14.64□□□□□ -0.07
NCOR1-219ENST00000580554 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
NCOR1-219ENST00000580554 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
NCOR1-219ENST00000580554 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
NCOR1-219ENST00000580554 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
NCOR1-219ENST00000580554 ZBTB22O15209 634 aa14.29□□□□□ -0.12
NCOR1-219ENST00000580554 NCAPD3P42695 1498 aa14.29□□□□□ -0.12
NCOR1-219ENST00000580554 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
NCOR1-219ENST00000580554 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
NCOR1-219ENST00000580554 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
NCOR1-219ENST00000580554 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
NCOR1-219ENST00000580554 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
NCOR1-219ENST00000580554 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
NCOR1-219ENST00000580554 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
NCOR1-219ENST00000580554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.143e-7■■■□□ 17.9
NCOR1-219ENST00000580554 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
NCOR1-219ENST00000580554 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
NCOR1-219ENST00000580554 NESP48681 1621 aa14.08□□□□□ -0.15
NCOR1-219ENST00000580554 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
NCOR1-219ENST00000580554 WIZO95785 1651 aa14.04□□□□□ -0.16
NCOR1-219ENST00000580554 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
NCOR1-219ENST00000580554 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
NCOR1-219ENST00000580554 CUX2O14529 1486 aa13.95□□□□□ -0.18
NCOR1-219ENST00000580554 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
NCOR1-219ENST00000580554 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
NCOR1-219ENST00000580554 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
NCOR1-219ENST00000580554 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
NCOR1-219ENST00000580554 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
NCOR1-219ENST00000580554 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
NCOR1-219ENST00000580554 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
NCOR1-219ENST00000580554 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
NCOR1-219ENST00000580554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
NCOR1-219ENST00000580554 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
NCOR1-219ENST00000580554 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
NCOR1-219ENST00000580554 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
NCOR1-219ENST00000580554 CFTRP13569 1480 aa13.74□□□□□ -0.21
NCOR1-219ENST00000580554 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
NCOR1-219ENST00000580554 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
NCOR1-219ENST00000580554 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
NCOR1-219ENST00000580554 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
NCOR1-219ENST00000580554 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
NCOR1-219ENST00000580554 WDR62O43379 1518 aa13.71□□□□□ -0.21
NCOR1-219ENST00000580554 CCDC88BA6NC98 1476 aa13.7□□□□□ -0.22
NCOR1-219ENST00000580554 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
NCOR1-219ENST00000580554 APLP2Q06481 763 aa13.63□□□□□ -0.23
NCOR1-219ENST00000580554 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
NCOR1-219ENST00000580554 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
NCOR1-219ENST00000580554 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
NCOR1-219ENST00000580554 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
NCOR1-219ENST00000580554 CAPN15O75808 1086 aa13.49□□□□□ -0.25
NCOR1-219ENST00000580554 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
NCOR1-219ENST00000580554 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
NCOR1-219ENST00000580554 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
NCOR1-219ENST00000580554 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
NCOR1-219ENST00000580554 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
NCOR1-219ENST00000580554 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
NCOR1-219ENST00000580554 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
NCOR1-219ENST00000580554 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
NCOR1-219ENST00000580554 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
NCOR1-219ENST00000580554 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
NCOR1-219ENST00000580554 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms