RNA–Protein interactions for RNA: ENST00000580471.1

SUPT6H-205, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-205ENST00000580471 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
SUPT6H-205ENST00000580471 ABCC9O60706 1549 aa23.33■■□□□ 1.32
SUPT6H-205ENST00000580471 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
SUPT6H-205ENST00000580471 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
SUPT6H-205ENST00000580471 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
SUPT6H-205ENST00000580471 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
SUPT6H-205ENST00000580471 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
SUPT6H-205ENST00000580471 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
SUPT6H-205ENST00000580471 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
SUPT6H-205ENST00000580471 NACADO15069 1562 aa21.07■□□□□ 0.96
SUPT6H-205ENST00000580471 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
SUPT6H-205ENST00000580471 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.96
SUPT6H-205ENST00000580471 CUX2O14529 1486 aa20.68■□□□□ 0.9
SUPT6H-205ENST00000580471 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
SUPT6H-205ENST00000580471 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
SUPT6H-205ENST00000580471 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
SUPT6H-205ENST00000580471 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
SUPT6H-205ENST00000580471 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
SUPT6H-205ENST00000580471 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
SUPT6H-205ENST00000580471 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
SUPT6H-205ENST00000580471 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
SUPT6H-205ENST00000580471 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
SUPT6H-205ENST00000580471 NESP48681 1621 aa19.65■□□□□ 0.74
SUPT6H-205ENST00000580471 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
SUPT6H-205ENST00000580471 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
SUPT6H-205ENST00000580471 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
SUPT6H-205ENST00000580471 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
SUPT6H-205ENST00000580471 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
SUPT6H-205ENST00000580471 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
SUPT6H-205ENST00000580471 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
SUPT6H-205ENST00000580471 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
SUPT6H-205ENST00000580471 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
SUPT6H-205ENST00000580471 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
SUPT6H-205ENST00000580471 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
SUPT6H-205ENST00000580471 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
SUPT6H-205ENST00000580471 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
SUPT6H-205ENST00000580471 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
SUPT6H-205ENST00000580471 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
SUPT6H-205ENST00000580471 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
SUPT6H-205ENST00000580471 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
SUPT6H-205ENST00000580471 WDR62O43379 1518 aa19.15■□□□□ 0.66
SUPT6H-205ENST00000580471 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
SUPT6H-205ENST00000580471 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
SUPT6H-205ENST00000580471 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
SUPT6H-205ENST00000580471 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
SUPT6H-205ENST00000580471 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
SUPT6H-205ENST00000580471 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
SUPT6H-205ENST00000580471 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
SUPT6H-205ENST00000580471 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
SUPT6H-205ENST00000580471 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
SUPT6H-205ENST00000580471 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
SUPT6H-205ENST00000580471 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
SUPT6H-205ENST00000580471 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
SUPT6H-205ENST00000580471 CHD1O14646 1710 aa18.57■□□□□ 0.56
SUPT6H-205ENST00000580471 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
SUPT6H-205ENST00000580471 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
SUPT6H-205ENST00000580471 KDM4FA0A1W2PPD8 638 aa18.4■□□□□ 0.54
SUPT6H-205ENST00000580471 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
SUPT6H-205ENST00000580471 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
SUPT6H-205ENST00000580471 CFTRP13569 1480 aa18.3■□□□□ 0.52
SUPT6H-205ENST00000580471 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
SUPT6H-205ENST00000580471 FBLN2P98095 1184 aa18.29■□□□□ 0.52
SUPT6H-205ENST00000580471 LMTK3Q96Q04 1460 aa18.24■□□□□ 0.51
SUPT6H-205ENST00000580471 FBXO41Q8TF61 875 aa18.23■□□□□ 0.51
SUPT6H-205ENST00000580471 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
SUPT6H-205ENST00000580471 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
SUPT6H-205ENST00000580471 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
SUPT6H-205ENST00000580471 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
SUPT6H-205ENST00000580471 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
SUPT6H-205ENST00000580471 SOCS7O14512 581 aa18.11■□□□□ 0.49
SUPT6H-205ENST00000580471 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
SUPT6H-205ENST00000580471 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
SUPT6H-205ENST00000580471 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
SUPT6H-205ENST00000580471 WIZO95785 1651 aa18.04■□□□□ 0.48
SUPT6H-205ENST00000580471 ILDR2Q71H61 639 aa18.01■□□□□ 0.47
SUPT6H-205ENST00000580471 KDM6BO15054 1643 aa18.01■□□□□ 0.47
SUPT6H-205ENST00000580471 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
SUPT6H-205ENST00000580471 ADGRL1O94910 1474 aa17.96■□□□□ 0.47
SUPT6H-205ENST00000580471 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
SUPT6H-205ENST00000580471 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
SUPT6H-205ENST00000580471 ABCC8Q09428 1581 aa17.91■□□□□ 0.46
SUPT6H-205ENST00000580471 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SUPT6H-205ENST00000580471 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
SUPT6H-205ENST00000580471 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
SUPT6H-205ENST00000580471 POLA1P09884 1462 aaPredicted RBP17.83■□□□□ 0.45
SUPT6H-205ENST00000580471 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
SUPT6H-205ENST00000580471 FAM69CQ0P6D2 419 aa17.83■□□□□ 0.44
SUPT6H-205ENST00000580471 DISP3Q9P2K9 1392 aa17.81■□□□□ 0.44
SUPT6H-205ENST00000580471 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
SUPT6H-205ENST00000580471 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
SUPT6H-205ENST00000580471 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
SUPT6H-205ENST00000580471 TSPOAP1O95153 1857 aa17.74■□□□□ 0.43
SUPT6H-205ENST00000580471 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
SUPT6H-205ENST00000580471 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
SUPT6H-205ENST00000580471 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
SUPT6H-205ENST00000580471 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
SUPT6H-205ENST00000580471 SOGA1O94964 1423 aa17.66■□□□□ 0.42
SUPT6H-205ENST00000580471 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
SUPT6H-205ENST00000580471 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
SUPT6H-205ENST00000580471 SPATA31D1Q6ZQQ2 1576 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms