RNA–Protein interactions for RNA: ENST00000580313.5

FLOT2-205, Transcript of flotillin 2, humanhuman

TSL 3

Gene FLOT2, Length 429 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT2-205ENST00000580313 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
FLOT2-205ENST00000580313 ABCC9O60706 1549 aa18.57■□□□□ 0.56
FLOT2-205ENST00000580313 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
FLOT2-205ENST00000580313 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
FLOT2-205ENST00000580313 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
FLOT2-205ENST00000580313 NACADO15069 1562 aa17.32■□□□□ 0.36
FLOT2-205ENST00000580313 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
FLOT2-205ENST00000580313 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
FLOT2-205ENST00000580313 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
FLOT2-205ENST00000580313 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
FLOT2-205ENST00000580313 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
FLOT2-205ENST00000580313 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
FLOT2-205ENST00000580313 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
FLOT2-205ENST00000580313 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
FLOT2-205ENST00000580313 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
FLOT2-205ENST00000580313 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
FLOT2-205ENST00000580313 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
FLOT2-205ENST00000580313 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
FLOT2-205ENST00000580313 DNAJC5Q9H3Z4 198 aa16.34■□□□□ 0.21
FLOT2-205ENST00000580313 CUX2O14529 1486 aa16.03■□□□□ 0.16
FLOT2-205ENST00000580313 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
FLOT2-205ENST00000580313 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
FLOT2-205ENST00000580313 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
FLOT2-205ENST00000580313 NESP48681 1621 aa15.91■□□□□ 0.14
FLOT2-205ENST00000580313 SMARCA4P51532 1647 aa15.87■□□□□ 0.13
FLOT2-205ENST00000580313 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
FLOT2-205ENST00000580313 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
FLOT2-205ENST00000580313 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
FLOT2-205ENST00000580313 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
FLOT2-205ENST00000580313 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
FLOT2-205ENST00000580313 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
FLOT2-205ENST00000580313 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
FLOT2-205ENST00000580313 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
FLOT2-205ENST00000580313 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
FLOT2-205ENST00000580313 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
FLOT2-205ENST00000580313 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
FLOT2-205ENST00000580313 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
FLOT2-205ENST00000580313 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
FLOT2-205ENST00000580313 WDR62O43379 1518 aa15.48■□□□□ 0.07
FLOT2-205ENST00000580313 WIZO95785 1651 aa15.46■□□□□ 0.07
FLOT2-205ENST00000580313 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
FLOT2-205ENST00000580313 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
FLOT2-205ENST00000580313 CFTRP13569 1480 aa15.27■□□□□ 0.04
FLOT2-205ENST00000580313 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
FLOT2-205ENST00000580313 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
FLOT2-205ENST00000580313 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
FLOT2-205ENST00000580313 TOP2AP11388 1531 aaKnown RBP15.19■□□□□ 0.02
FLOT2-205ENST00000580313 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
FLOT2-205ENST00000580313 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
FLOT2-205ENST00000580313 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
FLOT2-205ENST00000580313 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
FLOT2-205ENST00000580313 ZNF608Q9ULD9 1512 aaPredicted RBP15.13■□□□□ 0.01
FLOT2-205ENST00000580313 ARHGEF11O15085 1522 aa15.07■□□□□ 0
FLOT2-205ENST00000580313 IFT140Q96RY7 1462 aa15.05■□□□□ -0
FLOT2-205ENST00000580313 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
FLOT2-205ENST00000580313 TOPBP1Q92547 1522 aa15.03■□□□□ -0
FLOT2-205ENST00000580313 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
FLOT2-205ENST00000580313 CHD1O14646 1710 aa14.99□□□□□ -0.01
FLOT2-205ENST00000580313 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
FLOT2-205ENST00000580313 TARBP1Q13395 1621 aaKnown RBP14.95□□□□□ -0.02
FLOT2-205ENST00000580313 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
FLOT2-205ENST00000580313 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■■□ 19.4
FLOT2-205ENST00000580313 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
FLOT2-205ENST00000580313 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
FLOT2-205ENST00000580313 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
FLOT2-205ENST00000580313 FBLN2P98095 1184 aa14.85□□□□□ -0.03
FLOT2-205ENST00000580313 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
FLOT2-205ENST00000580313 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
FLOT2-205ENST00000580313 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
FLOT2-205ENST00000580313 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
FLOT2-205ENST00000580313 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.04
FLOT2-205ENST00000580313 SOGA1O94964 1423 aa14.76□□□□□ -0.05
FLOT2-205ENST00000580313 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
FLOT2-205ENST00000580313 CUX1P39880 1505 aa14.71□□□□□ -0.05
FLOT2-205ENST00000580313 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
FLOT2-205ENST00000580313 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
FLOT2-205ENST00000580313 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
FLOT2-205ENST00000580313 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
FLOT2-205ENST00000580313 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
FLOT2-205ENST00000580313 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
FLOT2-205ENST00000580313 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
FLOT2-205ENST00000580313 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
FLOT2-205ENST00000580313 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
FLOT2-205ENST00000580313 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
FLOT2-205ENST00000580313 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
FLOT2-205ENST00000580313 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
FLOT2-205ENST00000580313 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
FLOT2-205ENST00000580313 CEP170Q5SW79 1584 aa14.5□□□□□ -0.09
FLOT2-205ENST00000580313 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
FLOT2-205ENST00000580313 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
FLOT2-205ENST00000580313 NUP160Q12769 1436 aa14.45□□□□□ -0.1
FLOT2-205ENST00000580313 SHROOM2Q13796 1616 aa14.44□□□□□ -0.1
FLOT2-205ENST00000580313 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
FLOT2-205ENST00000580313 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
FLOT2-205ENST00000580313 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
FLOT2-205ENST00000580313 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
FLOT2-205ENST00000580313 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
FLOT2-205ENST00000580313 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
FLOT2-205ENST00000580313 PRG4Q92954 1404 aaPredicted RBP14.32□□□□□ -0.12
FLOT2-205ENST00000580313 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms