RNA–Protein interactions for RNA: ENST00000580175.1

LINC00511-207, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 436 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-207ENST00000580175 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
LINC00511-207ENST00000580175 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
LINC00511-207ENST00000580175 ABCC9O60706 1549 aa16.34■□□□□ 0.21
LINC00511-207ENST00000580175 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
LINC00511-207ENST00000580175 NACADO15069 1562 aa15.54■□□□□ 0.08
LINC00511-207ENST00000580175 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
LINC00511-207ENST00000580175 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
LINC00511-207ENST00000580175 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
LINC00511-207ENST00000580175 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
LINC00511-207ENST00000580175 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
LINC00511-207ENST00000580175 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00511-207ENST00000580175 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
LINC00511-207ENST00000580175 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
LINC00511-207ENST00000580175 SCRIBQ14160 1630 aa15.08■□□□□ 0
LINC00511-207ENST00000580175 SHROOM4Q9ULL8 1493 aa14.93□□□□□ -0.02
LINC00511-207ENST00000580175 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.04
LINC00511-207ENST00000580175 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
LINC00511-207ENST00000580175 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
LINC00511-207ENST00000580175 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
LINC00511-207ENST00000580175 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LINC00511-207ENST00000580175 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
LINC00511-207ENST00000580175 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
LINC00511-207ENST00000580175 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
LINC00511-207ENST00000580175 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
LINC00511-207ENST00000580175 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
LINC00511-207ENST00000580175 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
LINC00511-207ENST00000580175 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
LINC00511-207ENST00000580175 WIZO95785 1651 aa14.13□□□□□ -0.15
LINC00511-207ENST00000580175 NESP48681 1621 aa14.12□□□□□ -0.15
LINC00511-207ENST00000580175 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
LINC00511-207ENST00000580175 ERCC6Q03468 1493 aa14.05□□□□□ -0.16
LINC00511-207ENST00000580175 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
LINC00511-207ENST00000580175 CADPSQ9ULU8 1353 aa13.95□□□□□ -0.18
LINC00511-207ENST00000580175 CUX2O14529 1486 aa13.94□□□□□ -0.18
LINC00511-207ENST00000580175 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
LINC00511-207ENST00000580175 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
LINC00511-207ENST00000580175 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.18
LINC00511-207ENST00000580175 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
LINC00511-207ENST00000580175 CFTRP13569 1480 aa13.83□□□□□ -0.2
LINC00511-207ENST00000580175 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
LINC00511-207ENST00000580175 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
LINC00511-207ENST00000580175 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
LINC00511-207ENST00000580175 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
LINC00511-207ENST00000580175 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
LINC00511-207ENST00000580175 WDR62O43379 1518 aa13.74□□□□□ -0.21
LINC00511-207ENST00000580175 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
LINC00511-207ENST00000580175 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
LINC00511-207ENST00000580175 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
LINC00511-207ENST00000580175 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
LINC00511-207ENST00000580175 DNMBPQ6XZF7 1577 aa13.5□□□□□ -0.25
LINC00511-207ENST00000580175 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
LINC00511-207ENST00000580175 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
LINC00511-207ENST00000580175 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
LINC00511-207ENST00000580175 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
LINC00511-207ENST00000580175 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
LINC00511-207ENST00000580175 CUX1P39880 1505 aa13.41□□□□□ -0.26
LINC00511-207ENST00000580175 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
LINC00511-207ENST00000580175 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
LINC00511-207ENST00000580175 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00511-207ENST00000580175 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
LINC00511-207ENST00000580175 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
LINC00511-207ENST00000580175 SOGA1O94964 1423 aa13.37□□□□□ -0.27
LINC00511-207ENST00000580175 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.27
LINC00511-207ENST00000580175 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
LINC00511-207ENST00000580175 CHD1O14646 1710 aa13.25□□□□□ -0.29
LINC00511-207ENST00000580175 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
LINC00511-207ENST00000580175 SNAPC4Q5SXM2 1469 aa13.24□□□□□ -0.29
LINC00511-207ENST00000580175 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
LINC00511-207ENST00000580175 TOP2BQ02880 1626 aa13.23□□□□□ -0.29
LINC00511-207ENST00000580175 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
LINC00511-207ENST00000580175 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
LINC00511-207ENST00000580175 FBLN2P98095 1184 aa13.22□□□□□ -0.29
LINC00511-207ENST00000580175 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
LINC00511-207ENST00000580175 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
LINC00511-207ENST00000580175 GAPVD1Q14C86 1478 aa13.2□□□□□ -0.3
LINC00511-207ENST00000580175 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
LINC00511-207ENST00000580175 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
LINC00511-207ENST00000580175 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
LINC00511-207ENST00000580175 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
LINC00511-207ENST00000580175 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
LINC00511-207ENST00000580175 PBRM1Q86U86 1689 aa13.18□□□□□ -0.3
LINC00511-207ENST00000580175 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
LINC00511-207ENST00000580175 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
LINC00511-207ENST00000580175 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
LINC00511-207ENST00000580175 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
LINC00511-207ENST00000580175 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
LINC00511-207ENST00000580175 ARAP1Q96P48 1450 aa13.07□□□□□ -0.32
LINC00511-207ENST00000580175 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
LINC00511-207ENST00000580175 GRIN2AQ12879 1464 aa13.05□□□□□ -0.32
LINC00511-207ENST00000580175 ERICH3Q5RHP9 1530 aa13.05□□□□□ -0.32
LINC00511-207ENST00000580175 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
LINC00511-207ENST00000580175 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
LINC00511-207ENST00000580175 NUP160Q12769 1436 aa13.01□□□□□ -0.33
LINC00511-207ENST00000580175 IGF1RP08069 1367 aa12.97□□□□□ -0.33
LINC00511-207ENST00000580175 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
LINC00511-207ENST00000580175 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
LINC00511-207ENST00000580175 SHROOM2Q13796 1616 aa12.92□□□□□ -0.34
LINC00511-207ENST00000580175 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
LINC00511-207ENST00000580175 CUL7Q14999 1698 aa12.89□□□□□ -0.35
LINC00511-207ENST00000580175 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms