RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 NISCHQ9Y2I1 1504 aa47.29■■■■■ 5.16
SCO1-202ENST00000577335 CCDC180Q9P1Z9 1646 aa41.97■■■■■ 4.31
SCO1-202ENST00000577335 ABCC9O60706 1549 aa40.92■■■■■ 4.14
SCO1-202ENST00000577335 NACADO15069 1562 aa39.49■■■■□ 3.91
SCO1-202ENST00000577335 RB1CC1Q8TDY2 1594 aa39.47■■■■□ 3.91
SCO1-202ENST00000577335 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
SCO1-202ENST00000577335 ZCCHC6Q5VYS8 1495 aaKnown RBP39.41■■■■□ 3.9
SCO1-202ENST00000577335 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
SCO1-202ENST00000577335 DCAF1Q9Y4B6 1507 aa39.21■■■■□ 3.87
SCO1-202ENST00000577335 UNC13AQ9UPW8 1703 aa38.39■■■■□ 3.74
SCO1-202ENST00000577335 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.72
SCO1-202ENST00000577335 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
SCO1-202ENST00000577335 BICRAQ9NZM4 1560 aa38.21■■■■□ 3.71
SCO1-202ENST00000577335 SHROOM4Q9ULL8 1493 aa38■■■■□ 3.67
SCO1-202ENST00000577335 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
SCO1-202ENST00000577335 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
SCO1-202ENST00000577335 CC2D2AQ9P2K1 1620 aa37.01■■■■□ 3.52
SCO1-202ENST00000577335 CECR2Q9BXF3 1484 aa36.81■■■■□ 3.48
SCO1-202ENST00000577335 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
SCO1-202ENST00000577335 SMARCA4P51532 1647 aa36.62■■■■□ 3.45
SCO1-202ENST00000577335 NCAPD3P42695 1498 aa36.46■■■■□ 3.43
SCO1-202ENST00000577335 ATAD2BQ9ULI0 1458 aa36.45■■■■□ 3.43
SCO1-202ENST00000577335 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
SCO1-202ENST00000577335 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
SCO1-202ENST00000577335 PEG3Q9GZU2 1588 aa36.33■■■■□ 3.41
SCO1-202ENST00000577335 HMGXB3Q12766 1538 aa36.26■■■■□ 3.4
SCO1-202ENST00000577335 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
SCO1-202ENST00000577335 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
SCO1-202ENST00000577335 WIZO95785 1651 aa35.94■■■■□ 3.34
SCO1-202ENST00000577335 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
SCO1-202ENST00000577335 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
SCO1-202ENST00000577335 NESP48681 1621 aa35.41■■■■□ 3.26
SCO1-202ENST00000577335 CADPSQ9ULU8 1353 aa35.39■■■■□ 3.26
SCO1-202ENST00000577335 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
SCO1-202ENST00000577335 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
SCO1-202ENST00000577335 CCDC88BA6NC98 1476 aa35.24■■■■□ 3.23
SCO1-202ENST00000577335 CFTRP13569 1480 aa35.2■■■■□ 3.23
SCO1-202ENST00000577335 SUPT5HO00267 1087 aaKnown RBP35.19■■■■□ 3.22
SCO1-202ENST00000577335 CUX2O14529 1486 aa34.95■■■■□ 3.19
SCO1-202ENST00000577335 FANCD2Q9BXW9 1451 aa34.95■■■■□ 3.19
SCO1-202ENST00000577335 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
SCO1-202ENST00000577335 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
SCO1-202ENST00000577335 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
SCO1-202ENST00000577335 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
SCO1-202ENST00000577335 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
SCO1-202ENST00000577335 WDR62O43379 1518 aa34.7■■■■□ 3.14
SCO1-202ENST00000577335 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
SCO1-202ENST00000577335 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
SCO1-202ENST00000577335 TOPBP1Q92547 1522 aa34.39■■■■□ 3.1
SCO1-202ENST00000577335 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
SCO1-202ENST00000577335 IFT140Q96RY7 1462 aa34.2■■■■□ 3.06
SCO1-202ENST00000577335 CUX1P39880 1505 aa34.14■■■■□ 3.06
SCO1-202ENST00000577335 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
SCO1-202ENST00000577335 WRNQ14191 1432 aaPredicted RBP eCLIP34.03■■■■□ 3.04
SCO1-202ENST00000577335 FGD5Q6ZNL6 1462 aa34.02■■■■□ 3.04
SCO1-202ENST00000577335 SOGA1O94964 1423 aa34■■■■□ 3.03
SCO1-202ENST00000577335 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
SCO1-202ENST00000577335 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
SCO1-202ENST00000577335 RAD54L2Q9Y4B4 1467 aa33.91■■■■□ 3.02
SCO1-202ENST00000577335 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
SCO1-202ENST00000577335 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
SCO1-202ENST00000577335 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
SCO1-202ENST00000577335 WDR97A6NE52 1622 aa33.81■■■■□ 3
SCO1-202ENST00000577335 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
SCO1-202ENST00000577335 AQRO60306 1485 aaKnown RBP eCLIP33.78■■■■□ 31e-7■■■■■ 39.7
SCO1-202ENST00000577335 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■■□ 3
SCO1-202ENST00000577335 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
SCO1-202ENST00000577335 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
SCO1-202ENST00000577335 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
SCO1-202ENST00000577335 GAPVD1Q14C86 1478 aa33.6■■■□□ 2.97
SCO1-202ENST00000577335 OSCARQ8IYS5 282 aa33.54■■■□□ 2.96
SCO1-202ENST00000577335 ABCA5Q8WWZ7 1642 aa33.53■■■□□ 2.96
SCO1-202ENST00000577335 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
SCO1-202ENST00000577335 SNAPC4Q5SXM2 1469 aa33.48■■■□□ 2.95
SCO1-202ENST00000577335 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
SCO1-202ENST00000577335 FBLN2P98095 1184 aa33.37■■■□□ 2.93
SCO1-202ENST00000577335 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
SCO1-202ENST00000577335 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
SCO1-202ENST00000577335 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
SCO1-202ENST00000577335 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
SCO1-202ENST00000577335 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
SCO1-202ENST00000577335 CHD1O14646 1710 aa33.28■■■□□ 2.92
SCO1-202ENST00000577335 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
SCO1-202ENST00000577335 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
SCO1-202ENST00000577335 IGF1RP08069 1367 aa33.17■■■□□ 2.9
SCO1-202ENST00000577335 GRIN2AQ12879 1464 aa33.14■■■□□ 2.9
SCO1-202ENST00000577335 CLASP1Q7Z460 1538 aa33.04■■■□□ 2.88
SCO1-202ENST00000577335 CUL7Q14999 1698 aa33.03■■■□□ 2.88
SCO1-202ENST00000577335 NUP160Q12769 1436 aa33.02■■■□□ 2.88
SCO1-202ENST00000577335 CARMIL1Q5VZK9 1371 aa32.97■■■□□ 2.87
SCO1-202ENST00000577335 CHIC1Q5VXU3 224 aa32.95■■■□□ 2.87
SCO1-202ENST00000577335 RUSC2Q8N2Y8 1516 aa32.93■■■□□ 2.86
SCO1-202ENST00000577335 ARHGEF11O15085 1522 aa32.91■■■□□ 2.86
SCO1-202ENST00000577335 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
SCO1-202ENST00000577335 RIMBP3CA6NJZ7 1639 aa32.85■■■□□ 2.85
SCO1-202ENST00000577335 RIMBP3BA6NNM3 1639 aa32.85■■■□□ 2.85
SCO1-202ENST00000577335 RIMBP3Q9UFD9 1639 aa32.85■■■□□ 2.85
SCO1-202ENST00000577335 EEA1Q15075 1411 aa32.82■■■□□ 2.84
SCO1-202ENST00000577335 RAPGEF2Q9Y4G8 1499 aa32.79■■■□□ 2.84
SCO1-202ENST00000577335 KIAA0586Q9BVV6 1533 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms