RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
NDE1-212ENST00000577101 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
NDE1-212ENST00000577101 ABCC9O60706 1549 aa20.55■□□□□ 0.88
NDE1-212ENST00000577101 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
NDE1-212ENST00000577101 NACADO15069 1562 aa19.82■□□□□ 0.76
NDE1-212ENST00000577101 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
NDE1-212ENST00000577101 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
NDE1-212ENST00000577101 DCAF1Q9Y4B6 1507 aa19.74■□□□□ 0.75
NDE1-212ENST00000577101 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
NDE1-212ENST00000577101 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
NDE1-212ENST00000577101 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
NDE1-212ENST00000577101 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
NDE1-212ENST00000577101 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
NDE1-212ENST00000577101 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
NDE1-212ENST00000577101 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
NDE1-212ENST00000577101 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
NDE1-212ENST00000577101 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
NDE1-212ENST00000577101 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.57
NDE1-212ENST00000577101 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
NDE1-212ENST00000577101 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
NDE1-212ENST00000577101 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
NDE1-212ENST00000577101 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
NDE1-212ENST00000577101 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
NDE1-212ENST00000577101 WIZO95785 1651 aa18.29■□□□□ 0.52
NDE1-212ENST00000577101 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
NDE1-212ENST00000577101 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
NDE1-212ENST00000577101 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
NDE1-212ENST00000577101 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
NDE1-212ENST00000577101 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
NDE1-212ENST00000577101 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
NDE1-212ENST00000577101 NESP48681 1621 aa17.89■□□□□ 0.45
NDE1-212ENST00000577101 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
NDE1-212ENST00000577101 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
NDE1-212ENST00000577101 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
NDE1-212ENST00000577101 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
NDE1-212ENST00000577101 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
NDE1-212ENST00000577101 CFTRP13569 1480 aa17.7■□□□□ 0.42
NDE1-212ENST00000577101 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
NDE1-212ENST00000577101 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
NDE1-212ENST00000577101 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
NDE1-212ENST00000577101 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
NDE1-212ENST00000577101 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
NDE1-212ENST00000577101 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
NDE1-212ENST00000577101 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
NDE1-212ENST00000577101 WDR62O43379 1518 aa17.45■□□□□ 0.38
NDE1-212ENST00000577101 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
NDE1-212ENST00000577101 CUX2O14529 1486 aa17.4■□□□□ 0.38
NDE1-212ENST00000577101 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
NDE1-212ENST00000577101 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
NDE1-212ENST00000577101 CUX1P39880 1505 aa17.29■□□□□ 0.36
NDE1-212ENST00000577101 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
NDE1-212ENST00000577101 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
NDE1-212ENST00000577101 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
NDE1-212ENST00000577101 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
NDE1-212ENST00000577101 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
NDE1-212ENST00000577101 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
NDE1-212ENST00000577101 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
NDE1-212ENST00000577101 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
NDE1-212ENST00000577101 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
NDE1-212ENST00000577101 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
NDE1-212ENST00000577101 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
NDE1-212ENST00000577101 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
NDE1-212ENST00000577101 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
NDE1-212ENST00000577101 SOGA1O94964 1423 aa17.05■□□□□ 0.32
NDE1-212ENST00000577101 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.318e-7■□□□□ 11.3
NDE1-212ENST00000577101 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
NDE1-212ENST00000577101 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
NDE1-212ENST00000577101 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
NDE1-212ENST00000577101 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
NDE1-212ENST00000577101 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
NDE1-212ENST00000577101 CHD1O14646 1710 aa16.87■□□□□ 0.29
NDE1-212ENST00000577101 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
NDE1-212ENST00000577101 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
NDE1-212ENST00000577101 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
NDE1-212ENST00000577101 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
NDE1-212ENST00000577101 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
NDE1-212ENST00000577101 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
NDE1-212ENST00000577101 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
NDE1-212ENST00000577101 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
NDE1-212ENST00000577101 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
NDE1-212ENST00000577101 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
NDE1-212ENST00000577101 IGF1RP08069 1367 aa16.71■□□□□ 0.27
NDE1-212ENST00000577101 DNAJC5Q9H3Z4 198 aa16.7■□□□□ 0.26
NDE1-212ENST00000577101 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
NDE1-212ENST00000577101 CUL7Q14999 1698 aa16.66■□□□□ 0.26
NDE1-212ENST00000577101 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
NDE1-212ENST00000577101 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
NDE1-212ENST00000577101 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
NDE1-212ENST00000577101 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
NDE1-212ENST00000577101 FBLN2P98095 1184 aa16.63■□□□□ 0.25
NDE1-212ENST00000577101 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
NDE1-212ENST00000577101 NUP160Q12769 1436 aa16.6■□□□□ 0.25
NDE1-212ENST00000577101 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
NDE1-212ENST00000577101 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
NDE1-212ENST00000577101 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
NDE1-212ENST00000577101 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
NDE1-212ENST00000577101 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
NDE1-212ENST00000577101 SHROOM2Q13796 1616 aa16.52■□□□□ 0.23
NDE1-212ENST00000577101 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
NDE1-212ENST00000577101 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms