RNA–Protein interactions for RNA: ENST00000577038.1

MMD-203, Transcript of monocyte to macrophage differentiation associated, humanhuman

TSL 2

Gene MMD, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMD-203ENST00000577038 NISCHQ9Y2I1 1504 aa41.91■■■■■ 4.3
MMD-203ENST00000577038 ABCC9O60706 1549 aa37.99■■■■□ 3.67
MMD-203ENST00000577038 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
MMD-203ENST00000577038 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
MMD-203ENST00000577038 RB1CC1Q8TDY2 1594 aa35.96■■■■□ 3.35
MMD-203ENST00000577038 NACADO15069 1562 aa35.68■■■■□ 3.3
MMD-203ENST00000577038 DCAF8L2P0C7V8 631 aa35.56■■■■□ 3.28
MMD-203ENST00000577038 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
MMD-203ENST00000577038 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
MMD-203ENST00000577038 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
MMD-203ENST00000577038 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
MMD-203ENST00000577038 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
MMD-203ENST00000577038 DCAF1Q9Y4B6 1507 aa34.58■■■■□ 3.13
MMD-203ENST00000577038 SHROOM4Q9ULL8 1493 aa34.43■■■■□ 3.1
MMD-203ENST00000577038 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
MMD-203ENST00000577038 CC2D2AQ9P2K1 1620 aa34.25■■■■□ 3.07
MMD-203ENST00000577038 CECR2Q9BXF3 1484 aa34.25■■■■□ 3.07
MMD-203ENST00000577038 EIF4G1Q04637 1599 aaKnown RBP34.13■■■■□ 3.05
MMD-203ENST00000577038 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
MMD-203ENST00000577038 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
MMD-203ENST00000577038 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
MMD-203ENST00000577038 CUX2O14529 1486 aa32.81■■■□□ 2.84
MMD-203ENST00000577038 ERCC6Q03468 1493 aa32.76■■■□□ 2.84
MMD-203ENST00000577038 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
MMD-203ENST00000577038 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
MMD-203ENST00000577038 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
MMD-203ENST00000577038 NESP48681 1621 aa32.59■■■□□ 2.81
MMD-203ENST00000577038 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
MMD-203ENST00000577038 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
MMD-203ENST00000577038 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
MMD-203ENST00000577038 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
MMD-203ENST00000577038 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
MMD-203ENST00000577038 THOC2Q8NI27 1593 aaKnown RBP32.2■■■□□ 2.75
MMD-203ENST00000577038 PDS5BQ9NTI5 1447 aa32.1■■■□□ 2.73
MMD-203ENST00000577038 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
MMD-203ENST00000577038 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
MMD-203ENST00000577038 WIZO95785 1651 aa31.84■■■□□ 2.69
MMD-203ENST00000577038 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
MMD-203ENST00000577038 WDR62O43379 1518 aa31.74■■■□□ 2.67
MMD-203ENST00000577038 CEP164Q9UPV0 1460 aa31.62■■■□□ 2.65
MMD-203ENST00000577038 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
MMD-203ENST00000577038 FANCD2Q9BXW9 1451 aa31.6■■■□□ 2.65
MMD-203ENST00000577038 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
MMD-203ENST00000577038 CFTRP13569 1480 aa31.58■■■□□ 2.65
MMD-203ENST00000577038 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
MMD-203ENST00000577038 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
MMD-203ENST00000577038 URB2Q14146 1524 aaKnown RBP31.38■■■□□ 2.61
MMD-203ENST00000577038 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.58
MMD-203ENST00000577038 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
MMD-203ENST00000577038 IFT140Q96RY7 1462 aa31.03■■■□□ 2.56
MMD-203ENST00000577038 PRDM2Q13029 1718 aa30.99■■■□□ 2.55
MMD-203ENST00000577038 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
MMD-203ENST00000577038 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
MMD-203ENST00000577038 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
MMD-203ENST00000577038 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
MMD-203ENST00000577038 ABCC8Q09428 1581 aa30.86■■■□□ 2.53
MMD-203ENST00000577038 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
MMD-203ENST00000577038 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
MMD-203ENST00000577038 AQRO60306 1485 aaKnown RBP eCLIP30.76■■■□□ 2.523e-14■■■■□ 21.3
MMD-203ENST00000577038 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
MMD-203ENST00000577038 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
MMD-203ENST00000577038 CYB5RLQ6IPT4 315 aa30.67■■■□□ 2.5
MMD-203ENST00000577038 POLA1P09884 1462 aaPredicted RBP30.65■■■□□ 2.5
MMD-203ENST00000577038 FBLN2P98095 1184 aa30.6■■■□□ 2.49
MMD-203ENST00000577038 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
MMD-203ENST00000577038 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
MMD-203ENST00000577038 SOGA1O94964 1423 aa30.54■■■□□ 2.48
MMD-203ENST00000577038 CHD1O14646 1710 aa30.53■■■□□ 2.48
MMD-203ENST00000577038 ARAP1Q96P48 1450 aa30.48■■■□□ 2.47
MMD-203ENST00000577038 FGD5Q6ZNL6 1462 aa30.4■■■□□ 2.46
MMD-203ENST00000577038 TRHP20396 242 aaPredicted RBP30.37■■■□□ 2.45
MMD-203ENST00000577038 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
MMD-203ENST00000577038 CUX1P39880 1505 aa30.35■■■□□ 2.45
MMD-203ENST00000577038 CHMP7Q8WUX9 453 aaPredicted RBP30.34■■■□□ 2.45
MMD-203ENST00000577038 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
MMD-203ENST00000577038 CLASP1Q7Z460 1538 aa30.27■■■□□ 2.44
MMD-203ENST00000577038 GRIN2BQ13224 1484 aa30.26■■■□□ 2.44
MMD-203ENST00000577038 MAGI1Q96QZ7 1491 aaPredicted RBP30.26■■■□□ 2.44
MMD-203ENST00000577038 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
MMD-203ENST00000577038 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
MMD-203ENST00000577038 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
MMD-203ENST00000577038 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
MMD-203ENST00000577038 SUPT5HO00267 1087 aaKnown RBP30■■■□□ 2.39
MMD-203ENST00000577038 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
MMD-203ENST00000577038 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
MMD-203ENST00000577038 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
MMD-203ENST00000577038 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
MMD-203ENST00000577038 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
MMD-203ENST00000577038 NUP160Q12769 1436 aa29.81■■■□□ 2.36
MMD-203ENST00000577038 ADAMTS12P58397 1594 aa29.76■■■□□ 2.35
MMD-203ENST00000577038 CEP170Q5SW79 1584 aa29.76■■■□□ 2.35
MMD-203ENST00000577038 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
MMD-203ENST00000577038 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
MMD-203ENST00000577038 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
MMD-203ENST00000577038 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
MMD-203ENST00000577038 ERICH3Q5RHP9 1530 aa29.63■■■□□ 2.33
MMD-203ENST00000577038 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
MMD-203ENST00000577038 JPH4Q96JJ6 628 aa29.57■■■□□ 2.32
MMD-203ENST00000577038 PRG4Q92954 1404 aaPredicted RBP29.55■■■□□ 2.32
MMD-203ENST00000577038 IGF1RP08069 1367 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms