RNA–Protein interactions for RNA: ENST00000577031.5

PAM16-215, Transcript of presequence translocase associated motor 16, humanhuman

TSL 4 BASIC

Gene PAM16, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-215ENST00000577031 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
PAM16-215ENST00000577031 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
PAM16-215ENST00000577031 ABCC9O60706 1549 aa31.97■■■□□ 2.71
PAM16-215ENST00000577031 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
PAM16-215ENST00000577031 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
PAM16-215ENST00000577031 DCAF1Q9Y4B6 1507 aa31.26■■■□□ 2.59
PAM16-215ENST00000577031 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
PAM16-215ENST00000577031 NACADO15069 1562 aa31.14■■■□□ 2.58
PAM16-215ENST00000577031 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
PAM16-215ENST00000577031 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
PAM16-215ENST00000577031 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
PAM16-215ENST00000577031 UNC13AQ9UPW8 1703 aa30.2■■■□□ 2.43
PAM16-215ENST00000577031 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
PAM16-215ENST00000577031 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
PAM16-215ENST00000577031 CECR2Q9BXF3 1484 aa29.35■■■□□ 2.29
PAM16-215ENST00000577031 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
PAM16-215ENST00000577031 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
PAM16-215ENST00000577031 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
PAM16-215ENST00000577031 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
PAM16-215ENST00000577031 RSF1Q96T23 1441 aaPredicted RBP29.05■■■□□ 2.24
PAM16-215ENST00000577031 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
PAM16-215ENST00000577031 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
PAM16-215ENST00000577031 SMARCA2P51531 1590 aa28.85■■■□□ 2.21
PAM16-215ENST00000577031 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
PAM16-215ENST00000577031 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
PAM16-215ENST00000577031 WIZO95785 1651 aa28.82■■■□□ 2.2
PAM16-215ENST00000577031 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
PAM16-215ENST00000577031 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
PAM16-215ENST00000577031 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
PAM16-215ENST00000577031 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
PAM16-215ENST00000577031 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
PAM16-215ENST00000577031 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
PAM16-215ENST00000577031 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
PAM16-215ENST00000577031 CFTRP13569 1480 aa27.91■■■□□ 2.06
PAM16-215ENST00000577031 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
PAM16-215ENST00000577031 NESP48681 1621 aa27.83■■■□□ 2.05
PAM16-215ENST00000577031 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
PAM16-215ENST00000577031 PRDM2Q13029 1718 aa27.64■■■□□ 2.02
PAM16-215ENST00000577031 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
PAM16-215ENST00000577031 ERCC6Q03468 1493 aa27.55■■■□□ 2
PAM16-215ENST00000577031 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
PAM16-215ENST00000577031 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
PAM16-215ENST00000577031 WRNQ14191 1432 aaPredicted RBP eCLIP27.4■■□□□ 1.98
PAM16-215ENST00000577031 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
PAM16-215ENST00000577031 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
PAM16-215ENST00000577031 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
PAM16-215ENST00000577031 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
PAM16-215ENST00000577031 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
PAM16-215ENST00000577031 CUX1P39880 1505 aa27.26■■□□□ 1.96
PAM16-215ENST00000577031 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
PAM16-215ENST00000577031 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
PAM16-215ENST00000577031 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
PAM16-215ENST00000577031 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
PAM16-215ENST00000577031 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
PAM16-215ENST00000577031 WDR62O43379 1518 aa27.18■■□□□ 1.94
PAM16-215ENST00000577031 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
PAM16-215ENST00000577031 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
PAM16-215ENST00000577031 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
PAM16-215ENST00000577031 SOGA1O94964 1423 aa27.03■■□□□ 1.92
PAM16-215ENST00000577031 CUX2O14529 1486 aa26.96■■□□□ 1.91
PAM16-215ENST00000577031 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
PAM16-215ENST00000577031 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
PAM16-215ENST00000577031 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
PAM16-215ENST00000577031 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
PAM16-215ENST00000577031 KIF27Q86VH2 1401 aa26.8■■□□□ 1.88
PAM16-215ENST00000577031 TDRD9Q8NDG6 1382 aaKnown RBP26.79■■□□□ 1.88
PAM16-215ENST00000577031 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
PAM16-215ENST00000577031 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
PAM16-215ENST00000577031 EEA1Q15075 1411 aa26.73■■□□□ 1.87
PAM16-215ENST00000577031 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
PAM16-215ENST00000577031 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.872e-8■■■■■ 38.1
PAM16-215ENST00000577031 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.87
PAM16-215ENST00000577031 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
PAM16-215ENST00000577031 CSRNP3Q8WYN3 585 aa26.66■■□□□ 1.86
PAM16-215ENST00000577031 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
PAM16-215ENST00000577031 IGF1RP08069 1367 aa26.6■■□□□ 1.85
PAM16-215ENST00000577031 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
PAM16-215ENST00000577031 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
PAM16-215ENST00000577031 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
PAM16-215ENST00000577031 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
PAM16-215ENST00000577031 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
PAM16-215ENST00000577031 SNAPC4Q5SXM2 1469 aa26.44■■□□□ 1.82
PAM16-215ENST00000577031 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
PAM16-215ENST00000577031 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
PAM16-215ENST00000577031 CUL7Q14999 1698 aa26.41■■□□□ 1.82
PAM16-215ENST00000577031 PRXQ9BXM0 1461 aa26.39■■□□□ 1.82
PAM16-215ENST00000577031 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
PAM16-215ENST00000577031 FBLN2P98095 1184 aa26.37■■□□□ 1.81
PAM16-215ENST00000577031 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
PAM16-215ENST00000577031 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
PAM16-215ENST00000577031 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
PAM16-215ENST00000577031 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
PAM16-215ENST00000577031 KIF21BO75037 1637 aa26.32■■□□□ 1.8
PAM16-215ENST00000577031 LOC105371045A0A1W2PR82 267 aa26.28■■□□□ 1.8
PAM16-215ENST00000577031 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
PAM16-215ENST00000577031 GOLGA3Q08378 1498 aa26.28■■□□□ 1.8
PAM16-215ENST00000577031 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
PAM16-215ENST00000577031 CHD1O14646 1710 aa26.14■■□□□ 1.77
PAM16-215ENST00000577031 TNIKQ9UKE5 1360 aa26.1■■□□□ 1.77
PAM16-215ENST00000577031 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms