RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
TSR1-204ENST00000576112 ABCC9O60706 1549 aa33.62■■■□□ 2.97
TSR1-204ENST00000576112 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.97
TSR1-204ENST00000576112 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
TSR1-204ENST00000576112 NACADO15069 1562 aa31.68■■■□□ 2.66
TSR1-204ENST00000576112 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
TSR1-204ENST00000576112 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
TSR1-204ENST00000576112 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
TSR1-204ENST00000576112 PABPN1Q86U42 306 aaKnown RBP eCLIP31.21■■■□□ 2.59
TSR1-204ENST00000576112 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
TSR1-204ENST00000576112 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
TSR1-204ENST00000576112 ZCCHC6Q5VYS8 1495 aaKnown RBP30.92■■■□□ 2.54
TSR1-204ENST00000576112 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
TSR1-204ENST00000576112 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
TSR1-204ENST00000576112 SHROOM4Q9ULL8 1493 aa30.55■■■□□ 2.48
TSR1-204ENST00000576112 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
TSR1-204ENST00000576112 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
TSR1-204ENST00000576112 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.44
TSR1-204ENST00000576112 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
TSR1-204ENST00000576112 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
TSR1-204ENST00000576112 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
TSR1-204ENST00000576112 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
TSR1-204ENST00000576112 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
TSR1-204ENST00000576112 ERCC6Q03468 1493 aa28.98■■■□□ 2.23
TSR1-204ENST00000576112 DNAJC5Q9H3Z4 198 aa28.98■■■□□ 2.23
TSR1-204ENST00000576112 CUX2O14529 1486 aa28.97■■■□□ 2.23
TSR1-204ENST00000576112 BAZ1AQ9NRL2 1556 aaPredicted RBP28.94■■■□□ 2.22
TSR1-204ENST00000576112 NESP48681 1621 aa28.89■■■□□ 2.22
TSR1-204ENST00000576112 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
TSR1-204ENST00000576112 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
TSR1-204ENST00000576112 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
TSR1-204ENST00000576112 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
TSR1-204ENST00000576112 LAMC3Q9Y6N6 1575 aa28.62■■■□□ 2.17
TSR1-204ENST00000576112 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
TSR1-204ENST00000576112 WIZO95785 1651 aa28.47■■■□□ 2.15
TSR1-204ENST00000576112 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
TSR1-204ENST00000576112 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
TSR1-204ENST00000576112 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
TSR1-204ENST00000576112 WDR62O43379 1518 aa28.19■■■□□ 2.1
TSR1-204ENST00000576112 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
TSR1-204ENST00000576112 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
TSR1-204ENST00000576112 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
TSR1-204ENST00000576112 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
TSR1-204ENST00000576112 CFTRP13569 1480 aa28■■■□□ 2.07
TSR1-204ENST00000576112 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
TSR1-204ENST00000576112 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
TSR1-204ENST00000576112 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
TSR1-204ENST00000576112 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
TSR1-204ENST00000576112 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
TSR1-204ENST00000576112 TOPBP1Q92547 1522 aa27.51■■■□□ 2
TSR1-204ENST00000576112 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
TSR1-204ENST00000576112 IFT140Q96RY7 1462 aa27.49■■□□□ 1.99
TSR1-204ENST00000576112 EIF4G3O43432 1585 aaKnown RBP27.43■■□□□ 1.98
TSR1-204ENST00000576112 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
TSR1-204ENST00000576112 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
TSR1-204ENST00000576112 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
TSR1-204ENST00000576112 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
TSR1-204ENST00000576112 ABCC8Q09428 1581 aa27.34■■□□□ 1.97
TSR1-204ENST00000576112 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
TSR1-204ENST00000576112 CHD1O14646 1710 aa27.28■■□□□ 1.96
TSR1-204ENST00000576112 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
TSR1-204ENST00000576112 POLA1P09884 1462 aaPredicted RBP27.24■■□□□ 1.95
TSR1-204ENST00000576112 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.954e-7■■■■■ 46.9
TSR1-204ENST00000576112 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
TSR1-204ENST00000576112 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
TSR1-204ENST00000576112 CUX1P39880 1505 aa27.05■■□□□ 1.92
TSR1-204ENST00000576112 SOGA1O94964 1423 aa27.02■■□□□ 1.92
TSR1-204ENST00000576112 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
TSR1-204ENST00000576112 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
TSR1-204ENST00000576112 WDR97A6NE52 1622 aa26.98■■□□□ 1.91
TSR1-204ENST00000576112 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
TSR1-204ENST00000576112 FBLN2P98095 1184 aa26.96■■□□□ 1.91
TSR1-204ENST00000576112 CYB5RLQ6IPT4 315 aa26.91■■□□□ 1.9
TSR1-204ENST00000576112 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
TSR1-204ENST00000576112 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
TSR1-204ENST00000576112 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
TSR1-204ENST00000576112 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
TSR1-204ENST00000576112 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
TSR1-204ENST00000576112 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
TSR1-204ENST00000576112 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
TSR1-204ENST00000576112 GAPVD1Q14C86 1478 aa26.73■■□□□ 1.87
TSR1-204ENST00000576112 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
TSR1-204ENST00000576112 ABCA10Q8WWZ4 1543 aa26.71■■□□□ 1.87
TSR1-204ENST00000576112 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
TSR1-204ENST00000576112 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
TSR1-204ENST00000576112 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
TSR1-204ENST00000576112 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
TSR1-204ENST00000576112 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
TSR1-204ENST00000576112 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
TSR1-204ENST00000576112 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
TSR1-204ENST00000576112 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
TSR1-204ENST00000576112 CEP170Q5SW79 1584 aa26.51■■□□□ 1.83
TSR1-204ENST00000576112 NUP160Q12769 1436 aa26.43■■□□□ 1.82
TSR1-204ENST00000576112 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
TSR1-204ENST00000576112 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
TSR1-204ENST00000576112 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
TSR1-204ENST00000576112 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
TSR1-204ENST00000576112 KIF13AQ9H1H9 1805 aa26.15■■□□□ 1.78
TSR1-204ENST00000576112 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
TSR1-204ENST00000576112 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms