RNA–Protein interactions for RNA: ENST00000575892.1

AC009088.4-201, humanhuman

BASIC

Gene AC009088.4, Length 280 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.4-201ENST00000575892 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
AC009088.4-201ENST00000575892 ABCC9O60706 1549 aa25.14■■□□□ 1.62
AC009088.4-201ENST00000575892 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
AC009088.4-201ENST00000575892 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
AC009088.4-201ENST00000575892 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
AC009088.4-201ENST00000575892 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
AC009088.4-201ENST00000575892 NACADO15069 1562 aa23.52■■□□□ 1.36
AC009088.4-201ENST00000575892 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.33
AC009088.4-201ENST00000575892 UNC13AQ9UPW8 1703 aa23.09■■□□□ 1.29
AC009088.4-201ENST00000575892 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
AC009088.4-201ENST00000575892 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
AC009088.4-201ENST00000575892 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
AC009088.4-201ENST00000575892 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
AC009088.4-201ENST00000575892 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
AC009088.4-201ENST00000575892 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
AC009088.4-201ENST00000575892 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
AC009088.4-201ENST00000575892 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
AC009088.4-201ENST00000575892 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
AC009088.4-201ENST00000575892 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
AC009088.4-201ENST00000575892 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
AC009088.4-201ENST00000575892 CUX2O14529 1486 aa21.85■■□□□ 1.09
AC009088.4-201ENST00000575892 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
AC009088.4-201ENST00000575892 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
AC009088.4-201ENST00000575892 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
AC009088.4-201ENST00000575892 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
AC009088.4-201ENST00000575892 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
AC009088.4-201ENST00000575892 NESP48681 1621 aa21.42■■□□□ 1.02
AC009088.4-201ENST00000575892 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
AC009088.4-201ENST00000575892 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
AC009088.4-201ENST00000575892 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
AC009088.4-201ENST00000575892 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
AC009088.4-201ENST00000575892 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
AC009088.4-201ENST00000575892 THOC2Q8NI27 1593 aaKnown RBP21.25■□□□□ 0.99
AC009088.4-201ENST00000575892 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
AC009088.4-201ENST00000575892 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
AC009088.4-201ENST00000575892 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
AC009088.4-201ENST00000575892 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
AC009088.4-201ENST00000575892 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
AC009088.4-201ENST00000575892 WDR62O43379 1518 aa20.92■□□□□ 0.94
AC009088.4-201ENST00000575892 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
AC009088.4-201ENST00000575892 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
AC009088.4-201ENST00000575892 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
AC009088.4-201ENST00000575892 WIZO95785 1651 aa20.8■□□□□ 0.92
AC009088.4-201ENST00000575892 CFTRP13569 1480 aa20.69■□□□□ 0.9
AC009088.4-201ENST00000575892 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
AC009088.4-201ENST00000575892 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
AC009088.4-201ENST00000575892 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
AC009088.4-201ENST00000575892 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
AC009088.4-201ENST00000575892 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
AC009088.4-201ENST00000575892 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
AC009088.4-201ENST00000575892 IFT140Q96RY7 1462 aa20.5■□□□□ 0.87
AC009088.4-201ENST00000575892 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
AC009088.4-201ENST00000575892 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
AC009088.4-201ENST00000575892 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
AC009088.4-201ENST00000575892 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
AC009088.4-201ENST00000575892 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
AC009088.4-201ENST00000575892 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
AC009088.4-201ENST00000575892 FBLN2P98095 1184 aa20.37■□□□□ 0.85
AC009088.4-201ENST00000575892 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
AC009088.4-201ENST00000575892 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
AC009088.4-201ENST00000575892 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
AC009088.4-201ENST00000575892 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
AC009088.4-201ENST00000575892 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
AC009088.4-201ENST00000575892 CHD1O14646 1710 aa20.21■□□□□ 0.83
AC009088.4-201ENST00000575892 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
AC009088.4-201ENST00000575892 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
AC009088.4-201ENST00000575892 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
AC009088.4-201ENST00000575892 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
AC009088.4-201ENST00000575892 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
AC009088.4-201ENST00000575892 SOGA1O94964 1423 aa20.1■□□□□ 0.81
AC009088.4-201ENST00000575892 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.8
AC009088.4-201ENST00000575892 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
AC009088.4-201ENST00000575892 SYNJ1O43426 1573 aa20.03■□□□□ 0.8
AC009088.4-201ENST00000575892 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
AC009088.4-201ENST00000575892 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
AC009088.4-201ENST00000575892 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
AC009088.4-201ENST00000575892 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
AC009088.4-201ENST00000575892 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
AC009088.4-201ENST00000575892 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
AC009088.4-201ENST00000575892 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
AC009088.4-201ENST00000575892 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
AC009088.4-201ENST00000575892 CUX1P39880 1505 aa19.81■□□□□ 0.76
AC009088.4-201ENST00000575892 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
AC009088.4-201ENST00000575892 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
AC009088.4-201ENST00000575892 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
AC009088.4-201ENST00000575892 ABCA5Q8WWZ7 1642 aa19.64■□□□□ 0.73
AC009088.4-201ENST00000575892 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
AC009088.4-201ENST00000575892 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
AC009088.4-201ENST00000575892 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
AC009088.4-201ENST00000575892 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
AC009088.4-201ENST00000575892 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
AC009088.4-201ENST00000575892 NUP160Q12769 1436 aa19.55■□□□□ 0.72
AC009088.4-201ENST00000575892 ADAMTS12P58397 1594 aa19.54■□□□□ 0.72
AC009088.4-201ENST00000575892 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
AC009088.4-201ENST00000575892 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
AC009088.4-201ENST00000575892 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
AC009088.4-201ENST00000575892 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
AC009088.4-201ENST00000575892 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
AC009088.4-201ENST00000575892 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
AC009088.4-201ENST00000575892 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms