RNA–Protein interactions for RNA: ENST00000575842.5

ACTG1-210, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-210ENST00000575842 HYDINQ4G0P3 5121 aa13.76□□□□□ -0.21
ACTG1-210ENST00000575842 A0A0D9SG42 100 aa13.73□□□□□ -0.21
ACTG1-210ENST00000575842 APOBP04114 4563 aaKnown RBP13.69□□□□□ -0.22
ACTG1-210ENST00000575842 PKHD1P08F94 4074 aa13.68□□□□□ -0.22
ACTG1-210ENST00000575842 KRTAP15-1Q3LI76 137 aa13.65□□□□□ -0.22
ACTG1-210ENST00000575842 KRTAP10-4P60372 401 aaPredicted RBP13.62□□□□□ -0.23
ACTG1-210ENST00000575842 SMR3BP02814 79 aaPredicted RBP13.61□□□□□ -0.23
ACTG1-210ENST00000575842 S4R3F8 94 aa13.6□□□□□ -0.23
ACTG1-210ENST00000575842 C10orf95Q9H7T3 257 aa13.59□□□□□ -0.23
ACTG1-210ENST00000575842 DYNC1H1Q14204 4646 aaKnown RBP13.49□□□□□ -0.25
ACTG1-210ENST00000575842 KRTAP12-2P59991 146 aa13.46□□□□□ -0.25
ACTG1-210ENST00000575842 NDUFAF8A1L188 74 aa13.44□□□□□ -0.26
ACTG1-210ENST00000575842 EPPK1P58107 5090 aaKnown RBP13.44□□□□□ -0.26
ACTG1-210ENST00000575842 KRTAP10-8P60410 259 aa13.39□□□□□ -0.27
ACTG1-210ENST00000575842 FAT1Q14517 4588 aa13.39□□□□□ -0.27
ACTG1-210ENST00000575842 DMBT1Q9UGM3 2413 aaPredicted RBP13.39□□□□□ -0.27
ACTG1-210ENST00000575842 KRTAP12-1P59990 96 aa13.37□□□□□ -0.27
ACTG1-210ENST00000575842 FAT3Q8TDW7 4589 aa13.37□□□□□ -0.27
ACTG1-210ENST00000575842 XP32Q5T750 250 aa13.34□□□□□ -0.27
ACTG1-210ENST00000575842 LRP1Q07954 4544 aaKnown RBP13.32□□□□□ -0.28
ACTG1-210ENST00000575842 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
ACTG1-210ENST00000575842 A0A1B0GVY2 172 aa13.27□□□□□ -0.28
ACTG1-210ENST00000575842 TNXBP22105 4242 aa13.23□□□□□ -0.29
ACTG1-210ENST00000575842 M0QZ58 72 aa13.22□□□□□ -0.29
ACTG1-210ENST00000575842 HSPG2P98160 4391 aa13.13□□□□□ -0.31
ACTG1-210ENST00000575842 KIAA1109Q2LD37 5005 aa12.88□□□□□ -0.35
ACTG1-210ENST00000575842 HERC2O95714 4834 aa12.85□□□□□ -0.35
ACTG1-210ENST00000575842 MYCBP2O75592 4640 aa12.73□□□□□ -0.37
ACTG1-210ENST00000575842 PLAC4Q8WY50 150 aa12.71□□□□□ -0.38
ACTG1-210ENST00000575842 RYR1P21817 5038 aa12.7□□□□□ -0.38
ACTG1-210ENST00000575842 Q5VSD8 79 aa12.68□□□□□ -0.38
ACTG1-210ENST00000575842 KRTAP17-1Q9BYP8 105 aa12.63□□□□□ -0.39
ACTG1-210ENST00000575842 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
ACTG1-210ENST00000575842 R4GN34 69 aa12.63□□□□□ -0.39
ACTG1-210ENST00000575842 PCLOQ9Y6V0 5065 aa12.58□□□□□ -0.4
ACTG1-210ENST00000575842 MT1HL1P0DM35 61 aa12.5□□□□□ -0.41
ACTG1-210ENST00000575842 ABCA13Q86UQ4 5058 aa12.48□□□□□ -0.41
ACTG1-210ENST00000575842 LPAP08519 4548 aa12.48□□□□□ -0.41
ACTG1-210ENST00000575842 PP632Q6XCG6 107 aa12.43□□□□□ -0.42
ACTG1-210ENST00000575842 LUZP6Q538Z0 58 aa12.36□□□□□ -0.43
ACTG1-210ENST00000575842 LRP2P98164 4655 aa12.34□□□□□ -0.43
ACTG1-210ENST00000575842 A0A0A0MQY5 61 aa12.28□□□□□ -0.44
ACTG1-210ENST00000575842 LORP23490 312 aaPredicted RBP12.27□□□□□ -0.45
ACTG1-210ENST00000575842 J3QL48 77 aa12.12□□□□□ -0.47
ACTG1-210ENST00000575842 CAMK2N1Q7Z7J9 78 aa12.05□□□□□ -0.48
ACTG1-210ENST00000575842 SEC61BP60468 96 aaKnown RBP12.02□□□□□ -0.49
ACTG1-210ENST00000575842 MUC17Q685J3 4493 aa11.98□□□□□ -0.49
ACTG1-210ENST00000575842 HERC1Q15751 4861 aa11.95□□□□□ -0.5
ACTG1-210ENST00000575842 KRTAP23-1A1A580 65 aa11.93□□□□□ -0.5
ACTG1-210ENST00000575842 SPRR5A0A1B0GTR4 108 aa11.84□□□□□ -0.51
ACTG1-210ENST00000575842 KRTAP19-2Q3LHN2 52 aa11.78□□□□□ -0.52
ACTG1-210ENST00000575842 KRTAP4-1Q9BYQ7 146 aa11.78□□□□□ -0.52
ACTG1-210ENST00000575842 TNP1P09430 55 aa11.76□□□□□ -0.53
ACTG1-210ENST00000575842 HMCN2Q8NDA2 5059 aa11.53□□□□□ -0.56
ACTG1-210ENST00000575842 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
ACTG1-210ENST00000575842 UBR4Q5T4S7 5183 aa11.26□□□□□ -0.61
ACTG1-210ENST00000575842 PRO2289Q9P1D8 64 aa11.14□□□□□ -0.63
ACTG1-210ENST00000575842 SPRR2GQ9BYE4 73 aa11.09□□□□□ -0.63
ACTG1-210ENST00000575842 LCE3AQ5TA76 89 aa11□□□□□ -0.65
ACTG1-210ENST00000575842 INE1O15225 51 aa10.98□□□□□ -0.65
ACTG1-210ENST00000575842 RNF213Q63HN8 5207 aa10.96□□□□□ -0.66
ACTG1-210ENST00000575842 KRTAP19-1Q8IUB9 90 aa10.93□□□□□ -0.66
ACTG1-210ENST00000575842 KRTAP8-1Q8IUC2 63 aa10.83□□□□□ -0.68
ACTG1-210ENST00000575842 MUC2Q02817 5179 aa10.78□□□□□ -0.68
ACTG1-210ENST00000575842 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
ACTG1-210ENST00000575842 KRTAP19-8Q3LI54 63 aa10.51□□□□□ -0.73
ACTG1-210ENST00000575842 KRTAP12-3P60328 96 aa10.47□□□□□ -0.73
ACTG1-210ENST00000575842 M0R2T5 61 aa10.43□□□□□ -0.74
ACTG1-210ENST00000575842 MT1FP04733 61 aa10.42□□□□□ -0.74
ACTG1-210ENST00000575842 MT2AP02795 61 aa10.41□□□□□ -0.74
ACTG1-210ENST00000575842 KRTAP10-10P60014 251 aa10.39□□□□□ -0.75
ACTG1-210ENST00000575842 KRTAP10-5P60370 271 aa10.39□□□□□ -0.75
ACTG1-210ENST00000575842 KRTAP10-12P60413 245 aa10.39□□□□□ -0.75
ACTG1-210ENST00000575842 MT1HP80294 61 aa10.38□□□□□ -0.75
ACTG1-210ENST00000575842 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
ACTG1-210ENST00000575842 FAT4Q6V0I7 4981 aa10.36□□□□□ -0.75
ACTG1-210ENST00000575842 MT1XP80297 61 aa10.35□□□□□ -0.75
ACTG1-210ENST00000575842 MT1BP07438 61 aa10.27□□□□□ -0.76
ACTG1-210ENST00000575842 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.76
ACTG1-210ENST00000575842 KRTAP9-2Q9BYQ4 174 aa10.08□□□□□ -0.8
ACTG1-210ENST00000575842 KRTAP10-7P60409 375 aaPredicted RBP10.07□□□□□ -0.8
ACTG1-210ENST00000575842 LCE3CQ5T5A8 94 aa9.92□□□□□ -0.82
ACTG1-210ENST00000575842 KRTAP9-3Q9BYQ3 159 aa9.81□□□□□ -0.84
ACTG1-210ENST00000575842 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
ACTG1-210ENST00000575842 KRTAP19-5Q3LI72 72 aa9.79□□□□□ -0.84
ACTG1-210ENST00000575842 KRTAP9-6A0A140TA67 174 aa9.71□□□□□ -0.85
ACTG1-210ENST00000575842 KRTAP2-3P0C7H8 128 aa9.58□□□□□ -0.88
ACTG1-210ENST00000575842 KRTAP2-4Q9BYR9 128 aa9.58□□□□□ -0.88
ACTG1-210ENST00000575842 KRTAP2-1Q9BYU5 128 aa9.58□□□□□ -0.88
ACTG1-210ENST00000575842 KRTAP9-6A8MVA2 160 aa9.55□□□□□ -0.88
ACTG1-210ENST00000575842 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
ACTG1-210ENST00000575842 FSIP2Q5CZC0 6907 aa9.48□□□□□ -0.89
ACTG1-210ENST00000575842 KRTAP19-4Q3LI73 84 aa9.4□□□□□ -0.9
ACTG1-210ENST00000575842 LCE2BO14633 110 aa9.26□□□□□ -0.93
ACTG1-210ENST00000575842 KRTAP4-8A0A0G2JLE6 195 aa9.22□□□□□ -0.93
ACTG1-210ENST00000575842 KRTAP19-7Q3SYF9 63 aa9.22□□□□□ -0.93
ACTG1-210ENST00000575842 KRTAP4-8Q9BYQ9 185 aa9.22□□□□□ -0.93
ACTG1-210ENST00000575842 KRTAP4-7Q9BYR0 210 aa9.11□□□□□ -0.95
ACTG1-210ENST00000575842 USH2AO75445 5202 aa9.08□□□□□ -0.96
ACTG1-210ENST00000575842 KMT2DO14686 5537 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms