RNA–Protein interactions for RNA: ENST00000575300.1

TFAP4-205, Transcript of transcription factor AP-4, human

TSL 2

Gene TFAP4, Length 1,326 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-205	ENST00000575300	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.9	□□□□□ -0.19	4e-10	■□□□□ 11.2
TFAP4-205	ENST00000575300	DDX3X	O00571	662 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	7e-10	■■■■□ 24.2
TFAP4-205	ENST00000575300	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	20.93	■□□□□ 0.94	3e-9	■■■■■ 29.5
TFAP4-205	ENST00000575300	NONO	Q15233	471 aa	Known RBP eCLIP	14.87	□□□□□ -0.03	7e-8	■■■■■ 27.1
TFAP4-205	ENST00000575300	HNRNPM	P52272	730 aa	Known RBP eCLIP	20.44	■□□□□ 0.86	2e-7	■■■□□ 16
TFAP4-205	ENST00000575300	XRCC6	P12956	609 aa	Known RBP eCLIP	14.58	□□□□□ -0.08	2e-7	■■■■■ 30.5
TFAP4-205	ENST00000575300	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.1	□□□□□ -0.47	1e-6	■■■□□ 16.2
TFAP4-205	ENST00000575300	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	2e-6	■■□□□ 13.4
TFAP4-205	ENST00000575300	YBX3	P16989	372 aa	Known RBP eCLIP	16.8	■□□□□ 0.28	2e-6	■□□□□ 8.1
TFAP4-205	ENST00000575300	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	14.01	□□□□□ -0.17	2e-6	■■■■■ 149.1
TFAP4-205	ENST00000575300	AQR	O60306	1485 aa	Known RBP eCLIP	22.72	■■□□□ 1.23	3e-6	■■■■□ 19.6
TFAP4-205	ENST00000575300	PPIG	Q13427	754 aa	Known RBP eCLIP	14.67	□□□□□ -0.06	8e-6	■■■■□ 22.7
TFAP4-205	ENST00000575300	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	9e-6	■□□□□ 9.6
TFAP4-205	ENST00000575300	PUS1	Q9Y606	427 aa	Known RBP eCLIP	9.84	□□□□□ -0.83	1e-5	■■■■■ 49.7
TFAP4-205	ENST00000575300	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	15.17	■□□□□ 0.02	1e-5	■■■□□ 18

Retrieved 15 of 15 RNA–protein pairs in 38.2 ms