RNA–Protein interactions for RNA: ENST00000573614.5

PAM16-209, Transcript of presequence translocase associated motor 16, humanhuman

TSL 5

Gene PAM16, Length 650 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-209ENST00000573614 NISCHQ9Y2I1 1504 aa37.12■■■■□ 3.53
PAM16-209ENST00000573614 ABCC9O60706 1549 aa33.15■■■□□ 2.9
PAM16-209ENST00000573614 CCDC180Q9P1Z9 1646 aa33.09■■■□□ 2.89
PAM16-209ENST00000573614 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
PAM16-209ENST00000573614 NACADO15069 1562 aa31.35■■■□□ 2.61
PAM16-209ENST00000573614 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
PAM16-209ENST00000573614 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
PAM16-209ENST00000573614 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
PAM16-209ENST00000573614 MYO15BQ96JP2 1530 aa30.94■■■□□ 2.54
PAM16-209ENST00000573614 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
PAM16-209ENST00000573614 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
PAM16-209ENST00000573614 UNC13AQ9UPW8 1703 aa30.69■■■□□ 2.5
PAM16-209ENST00000573614 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
PAM16-209ENST00000573614 SHROOM4Q9ULL8 1493 aa30.27■■■□□ 2.44
PAM16-209ENST00000573614 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
PAM16-209ENST00000573614 CC2D2AQ9P2K1 1620 aa29.92■■■□□ 2.38
PAM16-209ENST00000573614 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
PAM16-209ENST00000573614 EIF4G1Q04637 1599 aaKnown RBP29.86■■■□□ 2.37
PAM16-209ENST00000573614 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
PAM16-209ENST00000573614 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
PAM16-209ENST00000573614 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
PAM16-209ENST00000573614 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
PAM16-209ENST00000573614 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
PAM16-209ENST00000573614 HMGXB3Q12766 1538 aa28.71■■■□□ 2.19
PAM16-209ENST00000573614 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
PAM16-209ENST00000573614 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
PAM16-209ENST00000573614 CUX2O14529 1486 aa28.63■■■□□ 2.17
PAM16-209ENST00000573614 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
PAM16-209ENST00000573614 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
PAM16-209ENST00000573614 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
PAM16-209ENST00000573614 NESP48681 1621 aa28.44■■■□□ 2.14
PAM16-209ENST00000573614 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
PAM16-209ENST00000573614 WIZO95785 1651 aa28.31■■■□□ 2.12
PAM16-209ENST00000573614 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
PAM16-209ENST00000573614 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
PAM16-209ENST00000573614 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
PAM16-209ENST00000573614 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
PAM16-209ENST00000573614 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
PAM16-209ENST00000573614 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
PAM16-209ENST00000573614 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.05
PAM16-209ENST00000573614 WDR62O43379 1518 aa27.79■■■□□ 2.04
PAM16-209ENST00000573614 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
PAM16-209ENST00000573614 CFTRP13569 1480 aa27.75■■■□□ 2.03
PAM16-209ENST00000573614 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
PAM16-209ENST00000573614 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
PAM16-209ENST00000573614 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
PAM16-209ENST00000573614 URB2Q14146 1524 aaKnown RBP27.48■■□□□ 1.99
PAM16-209ENST00000573614 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
PAM16-209ENST00000573614 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
PAM16-209ENST00000573614 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
PAM16-209ENST00000573614 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
PAM16-209ENST00000573614 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
PAM16-209ENST00000573614 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
PAM16-209ENST00000573614 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
PAM16-209ENST00000573614 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
PAM16-209ENST00000573614 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
PAM16-209ENST00000573614 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-8■■■■■ 38.1
PAM16-209ENST00000573614 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
PAM16-209ENST00000573614 POLA1P09884 1462 aaPredicted RBP26.92■■□□□ 1.9
PAM16-209ENST00000573614 RIMBP3CA6NJZ7 1639 aa26.88■■□□□ 1.89
PAM16-209ENST00000573614 RIMBP3BA6NNM3 1639 aa26.88■■□□□ 1.89
PAM16-209ENST00000573614 RIMBP3Q9UFD9 1639 aa26.88■■□□□ 1.89
PAM16-209ENST00000573614 SOGA1O94964 1423 aa26.85■■□□□ 1.89
PAM16-209ENST00000573614 ARHGEF11O15085 1522 aa26.83■■□□□ 1.89
PAM16-209ENST00000573614 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
PAM16-209ENST00000573614 CUX1P39880 1505 aa26.81■■□□□ 1.88
PAM16-209ENST00000573614 FBLN2P98095 1184 aa26.81■■□□□ 1.88
PAM16-209ENST00000573614 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
PAM16-209ENST00000573614 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
PAM16-209ENST00000573614 CHD1O14646 1710 aa26.72■■□□□ 1.87
PAM16-209ENST00000573614 CYB5RLQ6IPT4 315 aa26.71■■□□□ 1.87
PAM16-209ENST00000573614 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
PAM16-209ENST00000573614 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
PAM16-209ENST00000573614 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.86
PAM16-209ENST00000573614 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
PAM16-209ENST00000573614 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
PAM16-209ENST00000573614 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
PAM16-209ENST00000573614 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
PAM16-209ENST00000573614 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
PAM16-209ENST00000573614 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
PAM16-209ENST00000573614 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
PAM16-209ENST00000573614 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
PAM16-209ENST00000573614 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
PAM16-209ENST00000573614 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
PAM16-209ENST00000573614 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
PAM16-209ENST00000573614 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
PAM16-209ENST00000573614 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
PAM16-209ENST00000573614 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
PAM16-209ENST00000573614 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
PAM16-209ENST00000573614 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
PAM16-209ENST00000573614 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
PAM16-209ENST00000573614 NUP160Q12769 1436 aa26.16■■□□□ 1.78
PAM16-209ENST00000573614 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.78
PAM16-209ENST00000573614 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
PAM16-209ENST00000573614 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
PAM16-209ENST00000573614 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
PAM16-209ENST00000573614 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
PAM16-209ENST00000573614 IGF1RP08069 1367 aa25.99■■□□□ 1.75
PAM16-209ENST00000573614 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
PAM16-209ENST00000573614 CUL7Q14999 1698 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms