RNA–Protein interactions for RNA: ENST00000573500.5

PCTP-206, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 3 BASIC

Gene PCTP, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-206ENST00000573500 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
PCTP-206ENST00000573500 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
PCTP-206ENST00000573500 ABCC9O60706 1549 aa28.06■■■□□ 2.08
PCTP-206ENST00000573500 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
PCTP-206ENST00000573500 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
PCTP-206ENST00000573500 NACADO15069 1562 aa26.62■■□□□ 1.85
PCTP-206ENST00000573500 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
PCTP-206ENST00000573500 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
PCTP-206ENST00000573500 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
PCTP-206ENST00000573500 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
PCTP-206ENST00000573500 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
PCTP-206ENST00000573500 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
PCTP-206ENST00000573500 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
PCTP-206ENST00000573500 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
PCTP-206ENST00000573500 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
PCTP-206ENST00000573500 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
PCTP-206ENST00000573500 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
PCTP-206ENST00000573500 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
PCTP-206ENST00000573500 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
PCTP-206ENST00000573500 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
PCTP-206ENST00000573500 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.53
PCTP-206ENST00000573500 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
PCTP-206ENST00000573500 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
PCTP-206ENST00000573500 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
PCTP-206ENST00000573500 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
PCTP-206ENST00000573500 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
PCTP-206ENST00000573500 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
PCTP-206ENST00000573500 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
PCTP-206ENST00000573500 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
PCTP-206ENST00000573500 NESP48681 1621 aa24.16■■□□□ 1.46
PCTP-206ENST00000573500 WIZO95785 1651 aa24.09■■□□□ 1.45
PCTP-206ENST00000573500 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
PCTP-206ENST00000573500 CUX2O14529 1486 aa23.99■■□□□ 1.43
PCTP-206ENST00000573500 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
PCTP-206ENST00000573500 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
PCTP-206ENST00000573500 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
PCTP-206ENST00000573500 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
PCTP-206ENST00000573500 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
PCTP-206ENST00000573500 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
PCTP-206ENST00000573500 DNAJC5Q9H3Z4 198 aa23.72■■□□□ 1.39
PCTP-206ENST00000573500 CFTRP13569 1480 aa23.66■■□□□ 1.38
PCTP-206ENST00000573500 MRC2Q9UBG0 1479 aa23.65■■□□□ 1.38
PCTP-206ENST00000573500 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
PCTP-206ENST00000573500 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
PCTP-206ENST00000573500 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
PCTP-206ENST00000573500 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
PCTP-206ENST00000573500 WDR62O43379 1518 aa23.53■■□□□ 1.36
PCTP-206ENST00000573500 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
PCTP-206ENST00000573500 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PCTP-206ENST00000573500 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
PCTP-206ENST00000573500 TOPBP1Q92547 1522 aa23.2■■□□□ 1.3
PCTP-206ENST00000573500 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
PCTP-206ENST00000573500 IFT140Q96RY7 1462 aa23.14■■□□□ 1.29
PCTP-206ENST00000573500 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
PCTP-206ENST00000573500 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
PCTP-206ENST00000573500 OSCARQ8IYS5 282 aa23.06■■□□□ 1.28
PCTP-206ENST00000573500 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
PCTP-206ENST00000573500 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.262e-6■□□□□ 9
PCTP-206ENST00000573500 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
PCTP-206ENST00000573500 SOGA1O94964 1423 aa22.94■■□□□ 1.26
PCTP-206ENST00000573500 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
PCTP-206ENST00000573500 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
PCTP-206ENST00000573500 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
PCTP-206ENST00000573500 CUX1P39880 1505 aa22.9■■□□□ 1.26
PCTP-206ENST00000573500 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
PCTP-206ENST00000573500 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
PCTP-206ENST00000573500 FBLN2P98095 1184 aa22.85■■□□□ 1.25
PCTP-206ENST00000573500 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
PCTP-206ENST00000573500 CHMP7Q8WUX9 453 aaPredicted RBP22.69■■□□□ 1.22
PCTP-206ENST00000573500 WRNQ14191 1432 aaPredicted RBP eCLIP22.68■■□□□ 1.22
PCTP-206ENST00000573500 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
PCTP-206ENST00000573500 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
PCTP-206ENST00000573500 CHD1O14646 1710 aa22.65■■□□□ 1.22
PCTP-206ENST00000573500 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
PCTP-206ENST00000573500 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
PCTP-206ENST00000573500 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
PCTP-206ENST00000573500 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
PCTP-206ENST00000573500 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
PCTP-206ENST00000573500 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
PCTP-206ENST00000573500 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
PCTP-206ENST00000573500 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
PCTP-206ENST00000573500 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
PCTP-206ENST00000573500 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
PCTP-206ENST00000573500 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
PCTP-206ENST00000573500 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
PCTP-206ENST00000573500 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
PCTP-206ENST00000573500 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
PCTP-206ENST00000573500 CLASP1Q7Z460 1538 aa22.42■■□□□ 1.18
PCTP-206ENST00000573500 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
PCTP-206ENST00000573500 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
PCTP-206ENST00000573500 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
PCTP-206ENST00000573500 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
PCTP-206ENST00000573500 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
PCTP-206ENST00000573500 NUP160Q12769 1436 aa22.26■■□□□ 1.15
PCTP-206ENST00000573500 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
PCTP-206ENST00000573500 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
PCTP-206ENST00000573500 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
PCTP-206ENST00000573500 IGF1RP08069 1367 aa22.19■■□□□ 1.14
PCTP-206ENST00000573500 JPH4Q96JJ6 628 aa22.14■■□□□ 1.13
PCTP-206ENST00000573500 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms