RNA–Protein interactions for RNA: ENST00000572705.1

TRPV1-207, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-207ENST00000572705 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
TRPV1-207ENST00000572705 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
TRPV1-207ENST00000572705 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.38
TRPV1-207ENST00000572705 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
TRPV1-207ENST00000572705 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
TRPV1-207ENST00000572705 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
TRPV1-207ENST00000572705 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
TRPV1-207ENST00000572705 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
TRPV1-207ENST00000572705 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
TRPV1-207ENST00000572705 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
TRPV1-207ENST00000572705 ABCC9O60706 1549 aa15.97■□□□□ 0.15
TRPV1-207ENST00000572705 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
TRPV1-207ENST00000572705 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
TRPV1-207ENST00000572705 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
TRPV1-207ENST00000572705 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.093e-7■■■■□ 25.8
TRPV1-207ENST00000572705 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
TRPV1-207ENST00000572705 PPARGC1BQ86YN6 1023 aaKnown RBP15.57■□□□□ 0.08
TRPV1-207ENST00000572705 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
TRPV1-207ENST00000572705 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
TRPV1-207ENST00000572705 TRIM26Q12899 539 aaPredicted RBP15.44■□□□□ 0.06
TRPV1-207ENST00000572705 APLP2Q06481 763 aa15.43■□□□□ 0.06
TRPV1-207ENST00000572705 HRCP23327 699 aa15.42■□□□□ 0.06
TRPV1-207ENST00000572705 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
TRPV1-207ENST00000572705 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
TRPV1-207ENST00000572705 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
TRPV1-207ENST00000572705 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
TRPV1-207ENST00000572705 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
TRPV1-207ENST00000572705 NACADO15069 1562 aa15.17■□□□□ 0.02
TRPV1-207ENST00000572705 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
TRPV1-207ENST00000572705 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
TRPV1-207ENST00000572705 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TRPV1-207ENST00000572705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
TRPV1-207ENST00000572705 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
TRPV1-207ENST00000572705 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
TRPV1-207ENST00000572705 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
TRPV1-207ENST00000572705 ITGAEP38570 1179 aa14.9□□□□□ -0.02
TRPV1-207ENST00000572705 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
TRPV1-207ENST00000572705 WIZO95785 1651 aa14.78□□□□□ -0.04
TRPV1-207ENST00000572705 YTHDC1Q96MU7 727 aaKnown RBP14.73□□□□□ -0.05
TRPV1-207ENST00000572705 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
TRPV1-207ENST00000572705 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
TRPV1-207ENST00000572705 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
TRPV1-207ENST00000572705 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
TRPV1-207ENST00000572705 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
TRPV1-207ENST00000572705 SOGA1O94964 1423 aa14.67□□□□□ -0.06
TRPV1-207ENST00000572705 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
TRPV1-207ENST00000572705 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
TRPV1-207ENST00000572705 CEP162Q5TB80 1403 aa14.63□□□□□ -0.07
TRPV1-207ENST00000572705 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
TRPV1-207ENST00000572705 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
TRPV1-207ENST00000572705 EEA1Q15075 1411 aa14.57□□□□□ -0.08
TRPV1-207ENST00000572705 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
TRPV1-207ENST00000572705 CLIP1P30622 1438 aa14.56□□□□□ -0.08
TRPV1-207ENST00000572705 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
TRPV1-207ENST00000572705 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
TRPV1-207ENST00000572705 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
TRPV1-207ENST00000572705 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
TRPV1-207ENST00000572705 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
TRPV1-207ENST00000572705 ARID3CA6NKF2 412 aa14.44□□□□□ -0.1
TRPV1-207ENST00000572705 NEUROD1Q13562 356 aa14.44□□□□□ -0.1
TRPV1-207ENST00000572705 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
TRPV1-207ENST00000572705 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
TRPV1-207ENST00000572705 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
TRPV1-207ENST00000572705 FBLN2P98095 1184 aa14.4□□□□□ -0.1
TRPV1-207ENST00000572705 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
TRPV1-207ENST00000572705 MYT1Q01538 1121 aa14.35□□□□□ -0.11
TRPV1-207ENST00000572705 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
TRPV1-207ENST00000572705 CUX2O14529 1486 aa14.27□□□□□ -0.13
TRPV1-207ENST00000572705 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
TRPV1-207ENST00000572705 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
TRPV1-207ENST00000572705 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
TRPV1-207ENST00000572705 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
TRPV1-207ENST00000572705 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
TRPV1-207ENST00000572705 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
TRPV1-207ENST00000572705 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
TRPV1-207ENST00000572705 ACIN1Q9UKV3 1341 aaKnown RBP14.2□□□□□ -0.14
TRPV1-207ENST00000572705 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
TRPV1-207ENST00000572705 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
TRPV1-207ENST00000572705 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
TRPV1-207ENST00000572705 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
TRPV1-207ENST00000572705 ZNF777Q9ULD5 760 aaPredicted RBP14.14□□□□□ -0.15
TRPV1-207ENST00000572705 NEFLP07196 543 aa14.14□□□□□ -0.15
TRPV1-207ENST00000572705 MIER1Q8N108 512 aa14.14□□□□□ -0.15
TRPV1-207ENST00000572705 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
TRPV1-207ENST00000572705 MYT1LQ9UL68 1186 aa14.13□□□□□ -0.15
TRPV1-207ENST00000572705 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
TRPV1-207ENST00000572705 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
TRPV1-207ENST00000572705 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
TRPV1-207ENST00000572705 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
TRPV1-207ENST00000572705 HIRIP3Q9BW71 556 aaPredicted RBP14.08□□□□□ -0.16
TRPV1-207ENST00000572705 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
TRPV1-207ENST00000572705 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.16
TRPV1-207ENST00000572705 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
TRPV1-207ENST00000572705 DDX10Q13206 875 aaKnown RBP14.07□□□□□ -0.16
TRPV1-207ENST00000572705 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
TRPV1-207ENST00000572705 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
TRPV1-207ENST00000572705 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
TRPV1-207ENST00000572705 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
TRPV1-207ENST00000572705 ANP32CO43423 234 aa14.03□□□□□ -0.16
TRPV1-207ENST00000572705 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms