RNA–Protein interactions for RNA: ENST00000572536.1

PCTP-205, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 3

Gene PCTP, Length 647 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-205ENST00000572536 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
PCTP-205ENST00000572536 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
PCTP-205ENST00000572536 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
PCTP-205ENST00000572536 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
PCTP-205ENST00000572536 FOXD1Q16676 465 aa22.28■■□□□ 1.16
PCTP-205ENST00000572536 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
PCTP-205ENST00000572536 MSH5O43196 834 aa20.97■□□□□ 0.95
PCTP-205ENST00000572536 PIAS4Q8N2W9 510 aaPredicted RBP20.75■□□□□ 0.91
PCTP-205ENST00000572536 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
PCTP-205ENST00000572536 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
PCTP-205ENST00000572536 ADRA2BP18089 450 aa20.58■□□□□ 0.89
PCTP-205ENST00000572536 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
PCTP-205ENST00000572536 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
PCTP-205ENST00000572536 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
PCTP-205ENST00000572536 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
PCTP-205ENST00000572536 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
PCTP-205ENST00000572536 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
PCTP-205ENST00000572536 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
PCTP-205ENST00000572536 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
PCTP-205ENST00000572536 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
PCTP-205ENST00000572536 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
PCTP-205ENST00000572536 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
PCTP-205ENST00000572536 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
PCTP-205ENST00000572536 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
PCTP-205ENST00000572536 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
PCTP-205ENST00000572536 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
PCTP-205ENST00000572536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCTP-205ENST00000572536 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
PCTP-205ENST00000572536 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
PCTP-205ENST00000572536 KCNA4P22459 653 aa16.86■□□□□ 0.29
PCTP-205ENST00000572536 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
PCTP-205ENST00000572536 CAPN15O75808 1086 aa16.65■□□□□ 0.26
PCTP-205ENST00000572536 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
PCTP-205ENST00000572536 DSG3P32926 999 aa16.65■□□□□ 0.26
PCTP-205ENST00000572536 APLP2Q06481 763 aa16.49■□□□□ 0.23
PCTP-205ENST00000572536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
PCTP-205ENST00000572536 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
PCTP-205ENST00000572536 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PCTP-205ENST00000572536 ABCC9O60706 1549 aa16.33■□□□□ 0.2
PCTP-205ENST00000572536 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
PCTP-205ENST00000572536 ZCCHC6Q5VYS8 1495 aaKnown RBP16.31■□□□□ 0.2
PCTP-205ENST00000572536 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
PCTP-205ENST00000572536 ABCB7O75027 752 aa16.21■□□□□ 0.19
PCTP-205ENST00000572536 POTEHQ6S545 545 aa16.19■□□□□ 0.18
PCTP-205ENST00000572536 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
PCTP-205ENST00000572536 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
PCTP-205ENST00000572536 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PCTP-205ENST00000572536 NACADO15069 1562 aa16.01■□□□□ 0.15
PCTP-205ENST00000572536 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
PCTP-205ENST00000572536 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
PCTP-205ENST00000572536 POLA2Q14181 598 aa15.9■□□□□ 0.14
PCTP-205ENST00000572536 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
PCTP-205ENST00000572536 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
PCTP-205ENST00000572536 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
PCTP-205ENST00000572536 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
PCTP-205ENST00000572536 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
PCTP-205ENST00000572536 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
PCTP-205ENST00000572536 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
PCTP-205ENST00000572536 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
PCTP-205ENST00000572536 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
PCTP-205ENST00000572536 ZBTB22O15209 634 aa15.49■□□□□ 0.07
PCTP-205ENST00000572536 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
PCTP-205ENST00000572536 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
PCTP-205ENST00000572536 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
PCTP-205ENST00000572536 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
PCTP-205ENST00000572536 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
PCTP-205ENST00000572536 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCTP-205ENST00000572536 PIP4P2Q8N4L2 257 aa15.19■□□□□ 0.02
PCTP-205ENST00000572536 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
PCTP-205ENST00000572536 FBLN2P98095 1184 aa15.13■□□□□ 0.01
PCTP-205ENST00000572536 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
PCTP-205ENST00000572536 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
PCTP-205ENST00000572536 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
PCTP-205ENST00000572536 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
PCTP-205ENST00000572536 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
PCTP-205ENST00000572536 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
PCTP-205ENST00000572536 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
PCTP-205ENST00000572536 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
PCTP-205ENST00000572536 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
PCTP-205ENST00000572536 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
PCTP-205ENST00000572536 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
PCTP-205ENST00000572536 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
PCTP-205ENST00000572536 HAX1O00165 279 aa14.93□□□□□ -0.02
PCTP-205ENST00000572536 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
PCTP-205ENST00000572536 SSUH2Q9Y2M2 353 aa14.9□□□□□ -0.02
PCTP-205ENST00000572536 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
PCTP-205ENST00000572536 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
PCTP-205ENST00000572536 WIZO95785 1651 aa14.84□□□□□ -0.03
PCTP-205ENST00000572536 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.04
PCTP-205ENST00000572536 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
PCTP-205ENST00000572536 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
PCTP-205ENST00000572536 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
PCTP-205ENST00000572536 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
PCTP-205ENST00000572536 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
PCTP-205ENST00000572536 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
PCTP-205ENST00000572536 EVX2Q03828 476 aa14.74□□□□□ -0.05
PCTP-205ENST00000572536 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
PCTP-205ENST00000572536 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
PCTP-205ENST00000572536 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
PCTP-205ENST00000572536 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms