RNA–Protein interactions for RNA: ENST00000571961.7

JRK-203, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-203ENST00000571961 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
JRK-203ENST00000571961 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
JRK-203ENST00000571961 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
JRK-203ENST00000571961 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
JRK-203ENST00000571961 CCDC180Q9P1Z9 1646 aa27.58■■■□□ 2.01
JRK-203ENST00000571961 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
JRK-203ENST00000571961 CHIC1Q5VXU3 224 aa27.02■■□□□ 1.92
JRK-203ENST00000571961 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
JRK-203ENST00000571961 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
JRK-203ENST00000571961 ABCC9O60706 1549 aa26.58■■□□□ 1.85
JRK-203ENST00000571961 HRCP23327 699 aa26.57■■□□□ 1.84
JRK-203ENST00000571961 PCGF6Q9BYE7 350 aa26.47■■□□□ 1.83
JRK-203ENST00000571961 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
JRK-203ENST00000571961 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
JRK-203ENST00000571961 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
JRK-203ENST00000571961 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
JRK-203ENST00000571961 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
JRK-203ENST00000571961 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
JRK-203ENST00000571961 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
JRK-203ENST00000571961 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
JRK-203ENST00000571961 NACADO15069 1562 aa25.64■■□□□ 1.7
JRK-203ENST00000571961 CECR2Q9BXF3 1484 aa25.53■■□□□ 1.68
JRK-203ENST00000571961 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
JRK-203ENST00000571961 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
JRK-203ENST00000571961 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
JRK-203ENST00000571961 WIZO95785 1651 aa25.32■■□□□ 1.64
JRK-203ENST00000571961 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
JRK-203ENST00000571961 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
JRK-203ENST00000571961 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
JRK-203ENST00000571961 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
JRK-203ENST00000571961 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
JRK-203ENST00000571961 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
JRK-203ENST00000571961 BICRAQ9NZM4 1560 aa24.86■■□□□ 1.57
JRK-203ENST00000571961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
JRK-203ENST00000571961 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
JRK-203ENST00000571961 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
JRK-203ENST00000571961 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
JRK-203ENST00000571961 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
JRK-203ENST00000571961 TTBK1Q5TCY1 1321 aaPredicted RBP24.72■■□□□ 1.55
JRK-203ENST00000571961 SOGA1O94964 1423 aa24.69■■□□□ 1.54
JRK-203ENST00000571961 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
JRK-203ENST00000571961 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
JRK-203ENST00000571961 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.53
JRK-203ENST00000571961 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
JRK-203ENST00000571961 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.52
JRK-203ENST00000571961 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
JRK-203ENST00000571961 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
JRK-203ENST00000571961 EEA1Q15075 1411 aa24.51■■□□□ 1.51
JRK-203ENST00000571961 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
JRK-203ENST00000571961 DIEXFQ68CQ4 756 aaKnown RBP24.39■■□□□ 1.5
JRK-203ENST00000571961 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
JRK-203ENST00000571961 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
JRK-203ENST00000571961 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
JRK-203ENST00000571961 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
JRK-203ENST00000571961 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
JRK-203ENST00000571961 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
JRK-203ENST00000571961 KIF21BO75037 1637 aa24.16■■□□□ 1.46
JRK-203ENST00000571961 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
JRK-203ENST00000571961 CLIP1P30622 1438 aa24.16■■□□□ 1.46
JRK-203ENST00000571961 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
JRK-203ENST00000571961 CENPBP07199 599 aaPredicted RBP24.15■■□□□ 1.46
JRK-203ENST00000571961 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.46
JRK-203ENST00000571961 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
JRK-203ENST00000571961 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
JRK-203ENST00000571961 RANGAP1P46060 587 aaPredicted RBP24.08■■□□□ 1.45
JRK-203ENST00000571961 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
JRK-203ENST00000571961 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
JRK-203ENST00000571961 APLP2Q06481 763 aa24.03■■□□□ 1.44
JRK-203ENST00000571961 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
JRK-203ENST00000571961 DNAJC5BQ9UF47 199 aa23.92■■□□□ 1.42
JRK-203ENST00000571961 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
JRK-203ENST00000571961 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
JRK-203ENST00000571961 MIER1Q8N108 512 aa23.86■■□□□ 1.41
JRK-203ENST00000571961 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
JRK-203ENST00000571961 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
JRK-203ENST00000571961 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
JRK-203ENST00000571961 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
JRK-203ENST00000571961 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.39
JRK-203ENST00000571961 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
JRK-203ENST00000571961 CUX1P39880 1505 aa23.65■■□□□ 1.38
JRK-203ENST00000571961 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.38
JRK-203ENST00000571961 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
JRK-203ENST00000571961 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
JRK-203ENST00000571961 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
JRK-203ENST00000571961 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.35
JRK-203ENST00000571961 CFTRP13569 1480 aa23.5■■□□□ 1.35
JRK-203ENST00000571961 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
JRK-203ENST00000571961 MYT1Q01538 1121 aa23.48■■□□□ 1.35
JRK-203ENST00000571961 ITGAEP38570 1179 aa23.46■■□□□ 1.35
JRK-203ENST00000571961 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
JRK-203ENST00000571961 CUX2O14529 1486 aa23.38■■□□□ 1.33
JRK-203ENST00000571961 IGF1RP08069 1367 aa23.35■■□□□ 1.33
JRK-203ENST00000571961 RAB3GAP2Q9H2M9 1393 aa23.28■■□□□ 1.32
JRK-203ENST00000571961 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.31
JRK-203ENST00000571961 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
JRK-203ENST00000571961 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
JRK-203ENST00000571961 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
JRK-203ENST00000571961 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
JRK-203ENST00000571961 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
JRK-203ENST00000571961 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms