RNA–Protein interactions for RNA: ENST00000571908.1

RNF213-213, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-213ENST00000571908 NISCHQ9Y2I1 1504 aa17.48■□□□□ 0.39
RNF213-213ENST00000571908 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
RNF213-213ENST00000571908 ABCC9O60706 1549 aa15.1■□□□□ 0.01
RNF213-213ENST00000571908 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
RNF213-213ENST00000571908 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
RNF213-213ENST00000571908 NACADO15069 1562 aa14.48□□□□□ -0.09
RNF213-213ENST00000571908 RB1CC1Q8TDY2 1594 aa14.48□□□□□ -0.09
RNF213-213ENST00000571908 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
RNF213-213ENST00000571908 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
RNF213-213ENST00000571908 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
RNF213-213ENST00000571908 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
RNF213-213ENST00000571908 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
RNF213-213ENST00000571908 BICRAQ9NZM4 1560 aa14.12□□□□□ -0.15
RNF213-213ENST00000571908 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
RNF213-213ENST00000571908 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
RNF213-213ENST00000571908 EIF4G1Q04637 1599 aaKnown RBP13.69□□□□□ -0.22
RNF213-213ENST00000571908 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
RNF213-213ENST00000571908 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
RNF213-213ENST00000571908 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
RNF213-213ENST00000571908 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
RNF213-213ENST00000571908 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
RNF213-213ENST00000571908 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
RNF213-213ENST00000571908 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
RNF213-213ENST00000571908 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
RNF213-213ENST00000571908 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
RNF213-213ENST00000571908 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
RNF213-213ENST00000571908 WIZO95785 1651 aa13.34□□□□□ -0.27
RNF213-213ENST00000571908 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
RNF213-213ENST00000571908 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
RNF213-213ENST00000571908 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
RNF213-213ENST00000571908 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
RNF213-213ENST00000571908 NESP48681 1621 aa13.13□□□□□ -0.31
RNF213-213ENST00000571908 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
RNF213-213ENST00000571908 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
RNF213-213ENST00000571908 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
RNF213-213ENST00000571908 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
RNF213-213ENST00000571908 CFTRP13569 1480 aa12.98□□□□□ -0.33
RNF213-213ENST00000571908 CUX2O14529 1486 aa12.97□□□□□ -0.33
RNF213-213ENST00000571908 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
RNF213-213ENST00000571908 FANCD2Q9BXW9 1451 aa12.88□□□□□ -0.35
RNF213-213ENST00000571908 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
RNF213-213ENST00000571908 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
RNF213-213ENST00000571908 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
RNF213-213ENST00000571908 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
RNF213-213ENST00000571908 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
RNF213-213ENST00000571908 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
RNF213-213ENST00000571908 WDR62O43379 1518 aa12.73□□□□□ -0.37
RNF213-213ENST00000571908 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
RNF213-213ENST00000571908 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
RNF213-213ENST00000571908 CUX1P39880 1505 aa12.65□□□□□ -0.38
RNF213-213ENST00000571908 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
RNF213-213ENST00000571908 ABCC8Q09428 1581 aa12.62□□□□□ -0.39
RNF213-213ENST00000571908 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
RNF213-213ENST00000571908 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
RNF213-213ENST00000571908 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
RNF213-213ENST00000571908 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
RNF213-213ENST00000571908 SOGA1O94964 1423 aa12.57□□□□□ -0.4
RNF213-213ENST00000571908 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
RNF213-213ENST00000571908 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
RNF213-213ENST00000571908 IFT140Q96RY7 1462 aa12.55□□□□□ -0.4
RNF213-213ENST00000571908 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
RNF213-213ENST00000571908 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
RNF213-213ENST00000571908 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.47e-7■□□□□ 9
RNF213-213ENST00000571908 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
RNF213-213ENST00000571908 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
RNF213-213ENST00000571908 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
RNF213-213ENST00000571908 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
RNF213-213ENST00000571908 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
RNF213-213ENST00000571908 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
RNF213-213ENST00000571908 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.43
RNF213-213ENST00000571908 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
RNF213-213ENST00000571908 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
RNF213-213ENST00000571908 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
RNF213-213ENST00000571908 FBLN2P98095 1184 aa12.35□□□□□ -0.43
RNF213-213ENST00000571908 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
RNF213-213ENST00000571908 RUSC2Q8N2Y8 1516 aa12.34□□□□□ -0.43
RNF213-213ENST00000571908 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
RNF213-213ENST00000571908 IGF1RP08069 1367 aa12.33□□□□□ -0.44
RNF213-213ENST00000571908 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
RNF213-213ENST00000571908 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
RNF213-213ENST00000571908 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
RNF213-213ENST00000571908 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
RNF213-213ENST00000571908 CHD1O14646 1710 aa12.27□□□□□ -0.45
RNF213-213ENST00000571908 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
RNF213-213ENST00000571908 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
RNF213-213ENST00000571908 FHAD1B1AJZ9 1412 aa12.24□□□□□ -0.45
RNF213-213ENST00000571908 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
RNF213-213ENST00000571908 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
RNF213-213ENST00000571908 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
RNF213-213ENST00000571908 GRIN2AQ12879 1464 aa12.21□□□□□ -0.46
RNF213-213ENST00000571908 RIMBP3CA6NJZ7 1639 aa12.2□□□□□ -0.46
RNF213-213ENST00000571908 RIMBP3BA6NNM3 1639 aa12.2□□□□□ -0.46
RNF213-213ENST00000571908 RIMBP3Q9UFD9 1639 aa12.2□□□□□ -0.46
RNF213-213ENST00000571908 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
RNF213-213ENST00000571908 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
RNF213-213ENST00000571908 NUP160Q12769 1436 aa12.16□□□□□ -0.46
RNF213-213ENST00000571908 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
RNF213-213ENST00000571908 CLASP1Q7Z460 1538 aa12.15□□□□□ -0.46
RNF213-213ENST00000571908 PRXQ9BXM0 1461 aa12.13□□□□□ -0.47
RNF213-213ENST00000571908 CUL7Q14999 1698 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms