RNA–Protein interactions for RNA: ENST00000570115.5

SIN3A-214, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-214ENST00000570115 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
SIN3A-214ENST00000570115 ABCC9O60706 1549 aa25.05■■□□□ 1.6
SIN3A-214ENST00000570115 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
SIN3A-214ENST00000570115 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
SIN3A-214ENST00000570115 NACADO15069 1562 aa23.69■■□□□ 1.38
SIN3A-214ENST00000570115 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
SIN3A-214ENST00000570115 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
SIN3A-214ENST00000570115 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
SIN3A-214ENST00000570115 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
SIN3A-214ENST00000570115 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
SIN3A-214ENST00000570115 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
SIN3A-214ENST00000570115 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
SIN3A-214ENST00000570115 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
SIN3A-214ENST00000570115 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
SIN3A-214ENST00000570115 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
SIN3A-214ENST00000570115 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
SIN3A-214ENST00000570115 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
SIN3A-214ENST00000570115 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
SIN3A-214ENST00000570115 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
SIN3A-214ENST00000570115 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
SIN3A-214ENST00000570115 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SIN3A-214ENST00000570115 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
SIN3A-214ENST00000570115 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
SIN3A-214ENST00000570115 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
SIN3A-214ENST00000570115 CUX2O14529 1486 aa21.64■■□□□ 1.06
SIN3A-214ENST00000570115 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
SIN3A-214ENST00000570115 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
SIN3A-214ENST00000570115 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
SIN3A-214ENST00000570115 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
SIN3A-214ENST00000570115 NESP48681 1621 aa21.51■■□□□ 1.03
SIN3A-214ENST00000570115 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
SIN3A-214ENST00000570115 LAMC3Q9Y6N6 1575 aa21.37■■□□□ 1.01
SIN3A-214ENST00000570115 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
SIN3A-214ENST00000570115 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
SIN3A-214ENST00000570115 KIF21AQ7Z4S6 1674 aa21.22■□□□□ 0.99
SIN3A-214ENST00000570115 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
SIN3A-214ENST00000570115 WIZO95785 1651 aa21.18■□□□□ 0.98
SIN3A-214ENST00000570115 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
SIN3A-214ENST00000570115 WDR62O43379 1518 aa21.02■□□□□ 0.96
SIN3A-214ENST00000570115 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
SIN3A-214ENST00000570115 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
SIN3A-214ENST00000570115 CFTRP13569 1480 aa20.95■□□□□ 0.94
SIN3A-214ENST00000570115 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
SIN3A-214ENST00000570115 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
SIN3A-214ENST00000570115 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
SIN3A-214ENST00000570115 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
SIN3A-214ENST00000570115 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
SIN3A-214ENST00000570115 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
SIN3A-214ENST00000570115 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
SIN3A-214ENST00000570115 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
SIN3A-214ENST00000570115 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
SIN3A-214ENST00000570115 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
SIN3A-214ENST00000570115 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
SIN3A-214ENST00000570115 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
SIN3A-214ENST00000570115 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.85
SIN3A-214ENST00000570115 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
SIN3A-214ENST00000570115 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
SIN3A-214ENST00000570115 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
SIN3A-214ENST00000570115 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
SIN3A-214ENST00000570115 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.85
SIN3A-214ENST00000570115 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
SIN3A-214ENST00000570115 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
SIN3A-214ENST00000570115 CHD1O14646 1710 aa20.24■□□□□ 0.83
SIN3A-214ENST00000570115 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
SIN3A-214ENST00000570115 SOGA1O94964 1423 aa20.24■□□□□ 0.83
SIN3A-214ENST00000570115 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
SIN3A-214ENST00000570115 FBLN2P98095 1184 aa20.19■□□□□ 0.82
SIN3A-214ENST00000570115 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
SIN3A-214ENST00000570115 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
SIN3A-214ENST00000570115 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
SIN3A-214ENST00000570115 CUX1P39880 1505 aa20.16■□□□□ 0.82
SIN3A-214ENST00000570115 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
SIN3A-214ENST00000570115 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
SIN3A-214ENST00000570115 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
SIN3A-214ENST00000570115 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
SIN3A-214ENST00000570115 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
SIN3A-214ENST00000570115 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
SIN3A-214ENST00000570115 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
SIN3A-214ENST00000570115 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
SIN3A-214ENST00000570115 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
SIN3A-214ENST00000570115 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
SIN3A-214ENST00000570115 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
SIN3A-214ENST00000570115 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
SIN3A-214ENST00000570115 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
SIN3A-214ENST00000570115 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
SIN3A-214ENST00000570115 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
SIN3A-214ENST00000570115 TOP2BQ02880 1626 aa19.83■□□□□ 0.76
SIN3A-214ENST00000570115 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
SIN3A-214ENST00000570115 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
SIN3A-214ENST00000570115 ADAMTS12P58397 1594 aa19.77■□□□□ 0.76
SIN3A-214ENST00000570115 NUP160Q12769 1436 aa19.76■□□□□ 0.75
SIN3A-214ENST00000570115 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
SIN3A-214ENST00000570115 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
SIN3A-214ENST00000570115 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
SIN3A-214ENST00000570115 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
SIN3A-214ENST00000570115 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
SIN3A-214ENST00000570115 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
SIN3A-214ENST00000570115 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
SIN3A-214ENST00000570115 RUSC2Q8N2Y8 1516 aa19.5■□□□□ 0.71
SIN3A-214ENST00000570115 IGF1RP08069 1367 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms