RNA–Protein interactions for RNA: ENST00000570090.1

FUS-213, Transcript of FUS RNA binding protein, human

TSL 2

Gene FUS, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FUS-213	ENST00000570090	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.22	□□□□□ -0.29	5e-17	■■■■■ 32.7
FUS-213	ENST00000570090	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.79	■□□□□ 0.6	5e-8	■■■■■ 27.1
FUS-213	ENST00000570090	GRSF1	Q12849	480 aa	Known RBP eCLIP	19.49	■□□□□ 0.71	3e-28	■■■■□ 24.8
FUS-213	ENST00000570090	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	15.94	■□□□□ 0.14	2e-6	■■■■□ 22.9
FUS-213	ENST00000570090	FUS	P35637	526 aa	Known RBP eCLIP	12.37	□□□□□ -0.43	1e-10	■■■■□ 22.9
FUS-213	ENST00000570090	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	16.32	■□□□□ 0.2	1e-7	■■■■□ 21.7
FUS-213	ENST00000570090	TIA1	P31483	386 aa	Known RBP eCLIP	15.86	■□□□□ 0.13	1e-6	■■■■□ 20.9
FUS-213	ENST00000570090	RBM22	Q9NW64	420 aa	Known RBP eCLIP	17.3	■□□□□ 0.36	2e-43	■■■■□ 20.7
FUS-213	ENST00000570090	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.82	■□□□□ 0.6	2e-10	■■■■□ 20.5
FUS-213	ENST00000570090	SMNDC1	O75940	238 aa	Known RBP eCLIP	16.19	■□□□□ 0.18	8e-12	■■■■□ 19.7
FUS-213	ENST00000570090	AQR	O60306	1485 aa	Known RBP eCLIP	33.7	■■■□□ 2.99	2e-20	■■■□□ 17.3
FUS-213	ENST00000570090	EFTUD2	Q15029	972 aa	Known RBP eCLIP	16.26	■□□□□ 0.19	1e-16	■■■□□ 16.2
FUS-213	ENST00000570090	KHSRP	Q92945	711 aa	Known RBP eCLIP	21.42	■■□□□ 1.02	5e-19	■■■□□ 14.8
FUS-213	ENST00000570090	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	21.26	■□□□□ 0.99	2e-6	■■■□□ 14.6
FUS-213	ENST00000570090	ZRANB2	O95218	330 aa	Known RBP eCLIP	17.19	■□□□□ 0.34	6e-8	■■□□□ 14.4
FUS-213	ENST00000570090	TIAL1	Q01085	375 aa	Known RBP eCLIP	16.5	■□□□□ 0.23	1e-10	■■□□□ 14.2
FUS-213	ENST00000570090	AARS	P49588	968 aa	Known RBP eCLIP	19.29	■□□□□ 0.68	1e-5	■■□□□ 14
FUS-213	ENST00000570090	TAF15	Q92804	592 aa	Known RBP eCLIP	15.2	■□□□□ 0.02	8e-18	■■□□□ 14
FUS-213	ENST00000570090	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	2e-25	■■□□□ 14
FUS-213	ENST00000570090	NIPBL	Q6KC79	2804 aa	eCLIP	17.35	■□□□□ 0.37	1e-15	■■□□□ 12.8
FUS-213	ENST00000570090	G3BP1	Q13283	466 aa	Known RBP eCLIP	21.71	■■□□□ 1.07	5e-9	■■□□□ 12.7
FUS-213	ENST00000570090	RPS3	P23396	243 aa	Known RBP eCLIP	16.69	■□□□□ 0.26	1e-23	■■□□□ 12.7
FUS-213	ENST00000570090	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	17.12	■□□□□ 0.33	1e-13	■■□□□ 12
FUS-213	ENST00000570090	RBM5	P52756	815 aa	Known RBP eCLIP	22.88	■■□□□ 1.25	2e-25	■■□□□ 12
FUS-213	ENST00000570090	SRSF1	Q07955	248 aa	Known RBP eCLIP	18.63	■□□□□ 0.57	1e-17	■■□□□ 11.6
FUS-213	ENST00000570090	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.39	□□□□□ -0.27	1e-9	■■□□□ 11.5
FUS-213	ENST00000570090	PRPF4	O43172	522 aa	Known RBP eCLIP	16.85	■□□□□ 0.29	5e-13	■■□□□ 11.5
FUS-213	ENST00000570090	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	16.11	■□□□□ 0.17	6e-15	■■□□□ 11.4
FUS-213	ENST00000570090	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.01	■■■□□ 2.24	4e-8	■□□□□ 11.1
FUS-213	ENST00000570090	LARP4	Q71RC2	724 aa	Known RBP eCLIP	15.86	■□□□□ 0.13	1e-8	■□□□□ 10.7
FUS-213	ENST00000570090	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.54	■□□□□ 0.56	8e-29	■□□□□ 10.5
FUS-213	ENST00000570090	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	15.83	■□□□□ 0.12	1e-6	■□□□□ 10.4
FUS-213	ENST00000570090	EIF4G2	P78344	907 aa	Known RBP eCLIP	24	■■□□□ 1.43	8e-9	■□□□□ 10.2
FUS-213	ENST00000570090	YWHAG	P61981	247 aa	Known RBP eCLIP	18.49	■□□□□ 0.55	3e-7	■□□□□ 10
FUS-213	ENST00000570090	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	20.66	■□□□□ 0.9	5e-17	■□□□□ 10
FUS-213	ENST00000570090	CDC40	O60508	579 aa	Known RBP eCLIP	16.76	■□□□□ 0.27	2e-12	■□□□□ 10
FUS-213	ENST00000570090	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	14.63	□□□□□ -0.07	3e-6	■□□□□ 9.9
FUS-213	ENST00000570090	RPS11	P62280	158 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	2e-8	■□□□□ 9.6
FUS-213	ENST00000570090	U2AF2	P26368	475 aa	Known RBP eCLIP	19.35	■□□□□ 0.69	2e-9	■□□□□ 9.5
FUS-213	ENST00000570090	SAFB	Q15424	915 aa	Known RBP eCLIP	19.35	■□□□□ 0.69	1e-13	■□□□□ 9.3
FUS-213	ENST00000570090	NCBP2	P52298	156 aa	Known RBP eCLIP	15.76	■□□□□ 0.11	1e-12	■□□□□ 9.1
FUS-213	ENST00000570090	WDR43	Q15061	677 aa	Known RBP eCLIP	22.79	■■□□□ 1.24	7e-10	■□□□□ 9
FUS-213	ENST00000570090	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	17.09	■□□□□ 0.33	1e-8	■□□□□ 9
FUS-213	ENST00000570090	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.69	□□□□□ -0.38	2e-12	■□□□□ 8.9
FUS-213	ENST00000570090	NOLC1	Q14978	699 aa	Known RBP eCLIP	19.27	■□□□□ 0.68	3e-11	■□□□□ 8.8
FUS-213	ENST00000570090	PPIG	Q13427	754 aa	Known RBP eCLIP	21.71	■■□□□ 1.07	1e-31	■□□□□ 8.8
FUS-213	ENST00000570090	NPM1	P06748	294 aa	Known RBP eCLIP	32.34	■■■□□ 2.77	4e-8	■□□□□ 8.8
FUS-213	ENST00000570090	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	17.49	■□□□□ 0.39	7e-17	■□□□□ 8.7
FUS-213	ENST00000570090	PCBP1	Q15365	356 aa	Known RBP eCLIP	19.79	■□□□□ 0.76	9e-15	■□□□□ 8.6
FUS-213	ENST00000570090	AATF	Q9NY61	560 aa	Known RBP eCLIP	21.89	■■□□□ 1.09	1e-7	■□□□□ 8.6
FUS-213	ENST00000570090	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.14	■□□□□ 0.49	9e-6	■□□□□ 8.4

Retrieved 51 of 51 RNA–protein pairs in 24.1 ms