RNA–Protein interactions for RNA: ENST00000569595.5

NUP93-219, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-219ENST00000569595 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
NUP93-219ENST00000569595 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
NUP93-219ENST00000569595 ABCC9O60706 1549 aa19.21■□□□□ 0.67
NUP93-219ENST00000569595 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
NUP93-219ENST00000569595 NACADO15069 1562 aa18.33■□□□□ 0.52
NUP93-219ENST00000569595 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
NUP93-219ENST00000569595 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
NUP93-219ENST00000569595 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
NUP93-219ENST00000569595 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
NUP93-219ENST00000569595 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
NUP93-219ENST00000569595 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
NUP93-219ENST00000569595 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
NUP93-219ENST00000569595 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
NUP93-219ENST00000569595 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
NUP93-219ENST00000569595 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
NUP93-219ENST00000569595 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
NUP93-219ENST00000569595 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
NUP93-219ENST00000569595 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
NUP93-219ENST00000569595 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
NUP93-219ENST00000569595 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
NUP93-219ENST00000569595 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
NUP93-219ENST00000569595 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
NUP93-219ENST00000569595 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
NUP93-219ENST00000569595 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
NUP93-219ENST00000569595 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
NUP93-219ENST00000569595 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
NUP93-219ENST00000569595 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
NUP93-219ENST00000569595 WIZO95785 1651 aa16.61■□□□□ 0.25
NUP93-219ENST00000569595 NESP48681 1621 aa16.6■□□□□ 0.25
NUP93-219ENST00000569595 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
NUP93-219ENST00000569595 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
NUP93-219ENST00000569595 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
NUP93-219ENST00000569595 CUX2O14529 1486 aa16.45■□□□□ 0.22
NUP93-219ENST00000569595 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
NUP93-219ENST00000569595 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
NUP93-219ENST00000569595 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
NUP93-219ENST00000569595 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
NUP93-219ENST00000569595 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
NUP93-219ENST00000569595 CFTRP13569 1480 aa16.31■□□□□ 0.2
NUP93-219ENST00000569595 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
NUP93-219ENST00000569595 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
NUP93-219ENST00000569595 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
NUP93-219ENST00000569595 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
NUP93-219ENST00000569595 WDR62O43379 1518 aa16.2■□□□□ 0.18
NUP93-219ENST00000569595 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
NUP93-219ENST00000569595 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
NUP93-219ENST00000569595 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
NUP93-219ENST00000569595 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
NUP93-219ENST00000569595 SUPT5HO00267 1087 aaKnown RBP15.93■□□□□ 0.14
NUP93-219ENST00000569595 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
NUP93-219ENST00000569595 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
NUP93-219ENST00000569595 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
NUP93-219ENST00000569595 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
NUP93-219ENST00000569595 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
NUP93-219ENST00000569595 TARBP1Q13395 1621 aaKnown RBP15.82■□□□□ 0.12
NUP93-219ENST00000569595 CUX1P39880 1505 aa15.78■□□□□ 0.12
NUP93-219ENST00000569595 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
NUP93-219ENST00000569595 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
NUP93-219ENST00000569595 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
NUP93-219ENST00000569595 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
NUP93-219ENST00000569595 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
NUP93-219ENST00000569595 SOGA1O94964 1423 aa15.73■□□□□ 0.11
NUP93-219ENST00000569595 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
NUP93-219ENST00000569595 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
NUP93-219ENST00000569595 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
NUP93-219ENST00000569595 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
NUP93-219ENST00000569595 CHD1O14646 1710 aa15.58■□□□□ 0.08
NUP93-219ENST00000569595 WRNQ14191 1432 aaPredicted RBP eCLIP15.58■□□□□ 0.08
NUP93-219ENST00000569595 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
NUP93-219ENST00000569595 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
NUP93-219ENST00000569595 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
NUP93-219ENST00000569595 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
NUP93-219ENST00000569595 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
NUP93-219ENST00000569595 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
NUP93-219ENST00000569595 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
NUP93-219ENST00000569595 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
NUP93-219ENST00000569595 FBLN2P98095 1184 aa15.52■□□□□ 0.08
NUP93-219ENST00000569595 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
NUP93-219ENST00000569595 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
NUP93-219ENST00000569595 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
NUP93-219ENST00000569595 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
NUP93-219ENST00000569595 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
NUP93-219ENST00000569595 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
NUP93-219ENST00000569595 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.07
NUP93-219ENST00000569595 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
NUP93-219ENST00000569595 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
NUP93-219ENST00000569595 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
NUP93-219ENST00000569595 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
NUP93-219ENST00000569595 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
NUP93-219ENST00000569595 FHAD1B1AJZ9 1412 aa15.35■□□□□ 0.05
NUP93-219ENST00000569595 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
NUP93-219ENST00000569595 NUP160Q12769 1436 aa15.34■□□□□ 0.05
NUP93-219ENST00000569595 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
NUP93-219ENST00000569595 IGF1RP08069 1367 aa15.28■□□□□ 0.04
NUP93-219ENST00000569595 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
NUP93-219ENST00000569595 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
NUP93-219ENST00000569595 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
NUP93-219ENST00000569595 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
NUP93-219ENST00000569595 CUL7Q14999 1698 aa15.17■□□□□ 0.02
NUP93-219ENST00000569595 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms