RNA–Protein interactions for RNA: ENST00000569505.5

TAF1C-220, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

TSL 3

Gene TAF1C, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-220ENST00000569505 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
TAF1C-220ENST00000569505 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
TAF1C-220ENST00000569505 ABCC9O60706 1549 aa32.86■■■□□ 2.85
TAF1C-220ENST00000569505 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
TAF1C-220ENST00000569505 NACADO15069 1562 aa31.81■■■□□ 2.68
TAF1C-220ENST00000569505 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
TAF1C-220ENST00000569505 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
TAF1C-220ENST00000569505 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
TAF1C-220ENST00000569505 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
TAF1C-220ENST00000569505 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
TAF1C-220ENST00000569505 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
TAF1C-220ENST00000569505 BICRAQ9NZM4 1560 aa30.77■■■□□ 2.52
TAF1C-220ENST00000569505 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
TAF1C-220ENST00000569505 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.48
TAF1C-220ENST00000569505 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
TAF1C-220ENST00000569505 EIF4G1Q04637 1599 aaKnown RBP29.96■■■□□ 2.39
TAF1C-220ENST00000569505 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
TAF1C-220ENST00000569505 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
TAF1C-220ENST00000569505 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
TAF1C-220ENST00000569505 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
TAF1C-220ENST00000569505 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
TAF1C-220ENST00000569505 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
TAF1C-220ENST00000569505 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
TAF1C-220ENST00000569505 PEG3Q9GZU2 1588 aa29.34■■■□□ 2.29
TAF1C-220ENST00000569505 NCAPD3P42695 1498 aa29.27■■■□□ 2.28
TAF1C-220ENST00000569505 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
TAF1C-220ENST00000569505 WIZO95785 1651 aa29.21■■■□□ 2.27
TAF1C-220ENST00000569505 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
TAF1C-220ENST00000569505 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
TAF1C-220ENST00000569505 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
TAF1C-220ENST00000569505 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
TAF1C-220ENST00000569505 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
TAF1C-220ENST00000569505 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
TAF1C-220ENST00000569505 NESP48681 1621 aa28.5■■■□□ 2.15
TAF1C-220ENST00000569505 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
TAF1C-220ENST00000569505 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
TAF1C-220ENST00000569505 CFTRP13569 1480 aa28.34■■■□□ 2.13
TAF1C-220ENST00000569505 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
TAF1C-220ENST00000569505 KIF21AQ7Z4S6 1674 aa28.31■■■□□ 2.12
TAF1C-220ENST00000569505 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
TAF1C-220ENST00000569505 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
TAF1C-220ENST00000569505 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
TAF1C-220ENST00000569505 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
TAF1C-220ENST00000569505 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
TAF1C-220ENST00000569505 CUX2O14529 1486 aa27.95■■■□□ 2.07
TAF1C-220ENST00000569505 WDR62O43379 1518 aa27.92■■■□□ 2.06
TAF1C-220ENST00000569505 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
TAF1C-220ENST00000569505 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
TAF1C-220ENST00000569505 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
TAF1C-220ENST00000569505 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
TAF1C-220ENST00000569505 CUX1P39880 1505 aa27.62■■■□□ 2.01
TAF1C-220ENST00000569505 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
TAF1C-220ENST00000569505 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
TAF1C-220ENST00000569505 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
TAF1C-220ENST00000569505 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
TAF1C-220ENST00000569505 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
TAF1C-220ENST00000569505 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
TAF1C-220ENST00000569505 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
TAF1C-220ENST00000569505 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
TAF1C-220ENST00000569505 SOGA1O94964 1423 aa27.38■■□□□ 1.97
TAF1C-220ENST00000569505 WDR97A6NE52 1622 aa27.36■■□□□ 1.97
TAF1C-220ENST00000569505 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
TAF1C-220ENST00000569505 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
TAF1C-220ENST00000569505 DNAJC5Q9H3Z4 198 aa27.32■■□□□ 1.96
TAF1C-220ENST00000569505 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
TAF1C-220ENST00000569505 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
TAF1C-220ENST00000569505 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.946e-8■■■■□ 26.1
TAF1C-220ENST00000569505 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
TAF1C-220ENST00000569505 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
TAF1C-220ENST00000569505 PBRM1Q86U86 1689 aa27.16■■□□□ 1.94
TAF1C-220ENST00000569505 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
TAF1C-220ENST00000569505 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
TAF1C-220ENST00000569505 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
TAF1C-220ENST00000569505 SNAPC4Q5SXM2 1469 aa26.99■■□□□ 1.91
TAF1C-220ENST00000569505 CHD1O14646 1710 aa26.98■■□□□ 1.91
TAF1C-220ENST00000569505 MAGI1Q96QZ7 1491 aaPredicted RBP26.98■■□□□ 1.91
TAF1C-220ENST00000569505 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
TAF1C-220ENST00000569505 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
TAF1C-220ENST00000569505 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
TAF1C-220ENST00000569505 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
TAF1C-220ENST00000569505 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
TAF1C-220ENST00000569505 CUL7Q14999 1698 aa26.83■■□□□ 1.89
TAF1C-220ENST00000569505 FBLN2P98095 1184 aa26.8■■□□□ 1.88
TAF1C-220ENST00000569505 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
TAF1C-220ENST00000569505 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
TAF1C-220ENST00000569505 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
TAF1C-220ENST00000569505 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
TAF1C-220ENST00000569505 IGF1RP08069 1367 aa26.72■■□□□ 1.87
TAF1C-220ENST00000569505 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
TAF1C-220ENST00000569505 EEA1Q15075 1411 aa26.65■■□□□ 1.86
TAF1C-220ENST00000569505 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
TAF1C-220ENST00000569505 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
TAF1C-220ENST00000569505 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
TAF1C-220ENST00000569505 NUP160Q12769 1436 aa26.56■■□□□ 1.84
TAF1C-220ENST00000569505 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
TAF1C-220ENST00000569505 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
TAF1C-220ENST00000569505 FAM9AQ8IZU1 332 aaPredicted RBP26.47■■□□□ 1.83
TAF1C-220ENST00000569505 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
TAF1C-220ENST00000569505 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
TAF1C-220ENST00000569505 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms