RNA–Protein interactions for RNA: ENST00000569462.5

CSK-213, Transcript of C-terminal Src kinase, humanhuman

TSL 4

Gene CSK, Length 534 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-213ENST00000569462 NISCHQ9Y2I1 1504 aa45.91■■■■■ 4.94
CSK-213ENST00000569462 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
CSK-213ENST00000569462 ABCC9O60706 1549 aa39.97■■■■□ 3.99
CSK-213ENST00000569462 RB1CC1Q8TDY2 1594 aa38.46■■■■□ 3.75
CSK-213ENST00000569462 NACADO15069 1562 aa38.41■■■■□ 3.74
CSK-213ENST00000569462 DCAF8L2P0C7V8 631 aa38.31■■■■□ 3.72
CSK-213ENST00000569462 ZCCHC6Q5VYS8 1495 aaKnown RBP38.24■■■■□ 3.71
CSK-213ENST00000569462 MYO15BQ96JP2 1530 aa38.2■■■■□ 3.71
CSK-213ENST00000569462 DCAF1Q9Y4B6 1507 aa38.01■■■■□ 3.67
CSK-213ENST00000569462 UNC13AQ9UPW8 1703 aa37.53■■■■□ 3.6
CSK-213ENST00000569462 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.57
CSK-213ENST00000569462 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
CSK-213ENST00000569462 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
CSK-213ENST00000569462 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
CSK-213ENST00000569462 DNAJC5BQ9UF47 199 aa36.72■■■■□ 3.47
CSK-213ENST00000569462 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.4
CSK-213ENST00000569462 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
CSK-213ENST00000569462 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
CSK-213ENST00000569462 SMARCA4P51532 1647 aa35.62■■■■□ 3.29
CSK-213ENST00000569462 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
CSK-213ENST00000569462 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
CSK-213ENST00000569462 ATAD2BQ9ULI0 1458 aa35.45■■■■□ 3.27
CSK-213ENST00000569462 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
CSK-213ENST00000569462 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
CSK-213ENST00000569462 PEG3Q9GZU2 1588 aa35.3■■■■□ 3.24
CSK-213ENST00000569462 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
CSK-213ENST00000569462 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
CSK-213ENST00000569462 RSF1Q96T23 1441 aaPredicted RBP34.96■■■■□ 3.19
CSK-213ENST00000569462 WIZO95785 1651 aa34.95■■■■□ 3.19
CSK-213ENST00000569462 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
CSK-213ENST00000569462 NESP48681 1621 aa34.57■■■■□ 3.12
CSK-213ENST00000569462 LAMC3Q9Y6N6 1575 aa34.51■■■■□ 3.12
CSK-213ENST00000569462 ERCC6Q03468 1493 aa34.47■■■■□ 3.11
CSK-213ENST00000569462 CADPSQ9ULU8 1353 aa34.41■■■■□ 3.1
CSK-213ENST00000569462 PDS5BQ9NTI5 1447 aa34.3■■■■□ 3.08
CSK-213ENST00000569462 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
CSK-213ENST00000569462 CFTRP13569 1480 aa34.2■■■■□ 3.06
CSK-213ENST00000569462 CUX2O14529 1486 aa34.15■■■■□ 3.06
CSK-213ENST00000569462 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
CSK-213ENST00000569462 THOC2Q8NI27 1593 aaKnown RBP34.08■■■■□ 3.05
CSK-213ENST00000569462 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.03
CSK-213ENST00000569462 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
CSK-213ENST00000569462 CEP164Q9UPV0 1460 aa33.97■■■■□ 3.03
CSK-213ENST00000569462 MRC2Q9UBG0 1479 aa33.94■■■■□ 3.02
CSK-213ENST00000569462 PRDM2Q13029 1718 aa33.9■■■■□ 3.02
CSK-213ENST00000569462 WDR62O43379 1518 aa33.83■■■■□ 3.01
CSK-213ENST00000569462 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
CSK-213ENST00000569462 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
CSK-213ENST00000569462 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
CSK-213ENST00000569462 DNMBPQ6XZF7 1577 aa33.42■■■□□ 2.94
CSK-213ENST00000569462 IFT140Q96RY7 1462 aa33.27■■■□□ 2.92
CSK-213ENST00000569462 CUX1P39880 1505 aa33.18■■■□□ 2.9
CSK-213ENST00000569462 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
CSK-213ENST00000569462 DNAJC5Q9H3Z4 198 aa33.13■■■□□ 2.89
CSK-213ENST00000569462 ZNF608Q9ULD9 1512 aaPredicted RBP33.1■■■□□ 2.89
CSK-213ENST00000569462 TARBP1Q13395 1621 aaKnown RBP33.09■■■□□ 2.89
CSK-213ENST00000569462 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
CSK-213ENST00000569462 SOGA1O94964 1423 aa33.03■■■□□ 2.88
CSK-213ENST00000569462 RAD54L2Q9Y4B4 1467 aa33.01■■■□□ 2.88
CSK-213ENST00000569462 EIF4G3O43432 1585 aaKnown RBP32.97■■■□□ 2.87
CSK-213ENST00000569462 WRNQ14191 1432 aaPredicted RBP eCLIP32.96■■■□□ 2.87
CSK-213ENST00000569462 AQRO60306 1485 aaKnown RBP eCLIP32.91■■■□□ 2.867e-6■■■□□ 17.6
CSK-213ENST00000569462 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
CSK-213ENST00000569462 BIVM-ERCC5R4GMW8 1640 aa32.88■■■□□ 2.85
CSK-213ENST00000569462 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
CSK-213ENST00000569462 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
CSK-213ENST00000569462 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
CSK-213ENST00000569462 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
CSK-213ENST00000569462 OSCARQ8IYS5 282 aa32.7■■■□□ 2.83
CSK-213ENST00000569462 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
CSK-213ENST00000569462 GAPVD1Q14C86 1478 aa32.65■■■□□ 2.82
CSK-213ENST00000569462 ABCA5Q8WWZ7 1642 aa32.63■■■□□ 2.81
CSK-213ENST00000569462 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
CSK-213ENST00000569462 MAGI1Q96QZ7 1491 aaPredicted RBP32.59■■■□□ 2.81
CSK-213ENST00000569462 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
CSK-213ENST00000569462 CHD1O14646 1710 aa32.54■■■□□ 2.8
CSK-213ENST00000569462 FBLN2P98095 1184 aa32.5■■■□□ 2.79
CSK-213ENST00000569462 SYNJ2O15056 1496 aa32.46■■■□□ 2.79
CSK-213ENST00000569462 CHMP7Q8WUX9 453 aaPredicted RBP32.43■■■□□ 2.78
CSK-213ENST00000569462 ERICH3Q5RHP9 1530 aa32.38■■■□□ 2.77
CSK-213ENST00000569462 ADAMTS12P58397 1594 aa32.33■■■□□ 2.77
CSK-213ENST00000569462 FHAD1B1AJZ9 1412 aa32.29■■■□□ 2.76
CSK-213ENST00000569462 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
CSK-213ENST00000569462 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
CSK-213ENST00000569462 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
CSK-213ENST00000569462 ARHGEF11O15085 1522 aa32.18■■■□□ 2.74
CSK-213ENST00000569462 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
CSK-213ENST00000569462 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
CSK-213ENST00000569462 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
CSK-213ENST00000569462 IGF1RP08069 1367 aa32.15■■■□□ 2.74
CSK-213ENST00000569462 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
CSK-213ENST00000569462 NUP160Q12769 1436 aa32.11■■■□□ 2.73
CSK-213ENST00000569462 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
CSK-213ENST00000569462 CUL7Q14999 1698 aa32.07■■■□□ 2.72
CSK-213ENST00000569462 CARMIL1Q5VZK9 1371 aa31.95■■■□□ 2.71
CSK-213ENST00000569462 RUSC2Q8N2Y8 1516 aa31.94■■■□□ 2.7
CSK-213ENST00000569462 ARAP1Q96P48 1450 aa31.92■■■□□ 2.7
CSK-213ENST00000569462 CYB5RLQ6IPT4 315 aa31.86■■■□□ 2.69
CSK-213ENST00000569462 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
CSK-213ENST00000569462 KIAA0586Q9BVV6 1533 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms