RNA: ENST00000569443.5

CBFA2T3-209, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 5

Gene CBFA2T3, Length 469 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-209ENST00000569443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■■ 162.5
CBFA2T3-209ENST00000569443 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■■ 108.8
CBFA2T3-209ENST00000569443 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.481e-7■■■■■ 65.4
CBFA2T3-209ENST00000569443 AATFQ9NY61 560 aaKnown RBP eCLIP15.45■□□□□ 0.065e-7■■■■■ 59.1
CBFA2T3-209ENST00000569443 AGGF1Q8N302 714 aaeCLIP12.68□□□□□ -0.382e-7■■■■■ 53
CBFA2T3-209ENST00000569443 HNRNPLP14866 589 aaKnown RBP eCLIP13.13□□□□□ -0.315e-7■■■■■ 51
CBFA2T3-209ENST00000569443 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 50.6
CBFA2T3-209ENST00000569443 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■■■ 44.1
CBFA2T3-209ENST00000569443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.045e-7■■■■■ 43.6
CBFA2T3-209ENST00000569443 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■■■■■ 42.4
CBFA2T3-209ENST00000569443 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.745e-7■■■■■ 40.3
CBFA2T3-209ENST00000569443 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.124e-6■■■■■ 37.6
CBFA2T3-209ENST00000569443 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.54□□□□□ -0.727e-7■■■■■ 32
CBFA2T3-209ENST00000569443 AKAP1Q92667 903 aaKnown RBP eCLIP11.1□□□□□ -0.634e-8■■■■■ 28
CBFA2T3-209ENST00000569443 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■■■■■ 27.4
CBFA2T3-209ENST00000569443 DDX6P26196 483 aaKnown RBP eCLIP13.51□□□□□ -0.256e-6■■■■■ 27
CBFA2T3-209ENST00000569443 UPF1Q92900 1129 aaKnown RBP eCLIP16.83■□□□□ 0.282e-6■■■■□ 26.6
CBFA2T3-209ENST00000569443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■■■□ 25.3
CBFA2T3-209ENST00000569443 EWSR1Q01844 656 aaKnown RBP eCLIP9.8□□□□□ -0.848e-8■■■■□ 24.9
CBFA2T3-209ENST00000569443 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■■■■□ 24.6
CBFA2T3-209ENST00000569443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.791e-6■■■■□ 24.6
CBFA2T3-209ENST00000569443 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.58□□□□□ -0.244e-6■■■■□ 24.6
CBFA2T3-209ENST00000569443 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.237e-8■■■■□ 24
CBFA2T3-209ENST00000569443 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■□ 23.9
CBFA2T3-209ENST00000569443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.235e-6■■■■□ 23.6
CBFA2T3-209ENST00000569443 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.76□□□□□ -0.375e-7■■■■□ 23.3
CBFA2T3-209ENST00000569443 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■■□ 23.2
CBFA2T3-209ENST00000569443 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.079e-7■■■■□ 23.1
CBFA2T3-209ENST00000569443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■■■■□ 23
CBFA2T3-209ENST00000569443 SMNDC1O75940 238 aaKnown RBP eCLIP11.41□□□□□ -0.581e-6■■■■□ 22.9
CBFA2T3-209ENST00000569443 YWHAGP61981 247 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■■□ 22.4
CBFA2T3-209ENST00000569443 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.152e-8■■■■□ 22.2
CBFA2T3-209ENST00000569443 GTF2F1P35269 517 aaKnown RBP eCLIP13.63□□□□□ -0.238e-7■■■■□ 22
CBFA2T3-209ENST00000569443 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.02□□□□□ -0.497e-6■■■■□ 22
CBFA2T3-209ENST00000569443 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■■□ 22
CBFA2T3-209ENST00000569443 EFTUD2Q15029 972 aaKnown RBP eCLIP12.54□□□□□ -0.46e-8■■■■□ 21.7
CBFA2T3-209ENST00000569443 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.114e-6■■■■□ 21.5
CBFA2T3-209ENST00000569443 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■□ 21.4
CBFA2T3-209ENST00000569443 HNRNPKP61978 463 aaKnown RBP eCLIP12.71□□□□□ -0.375e-6■■■■□ 21.3
CBFA2T3-209ENST00000569443 LSM11P83369 360 aaKnown RBP eCLIP11.39□□□□□ -0.591e-6■■■■□ 21.3
CBFA2T3-209ENST00000569443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■□ 20.9
CBFA2T3-209ENST00000569443 TARDBPQ13148 414 aaKnown RBP eCLIP12.37□□□□□ -0.435e-7■■■■□ 20.5
CBFA2T3-209ENST00000569443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.86□□□□□ -0.519e-7■■■■□ 20
CBFA2T3-209ENST00000569443 SRSF7Q16629 238 aaKnown RBP eCLIP10.49□□□□□ -0.736e-6■■■■□ 19.7
CBFA2T3-209ENST00000569443 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.774e-7■■■■□ 19.6
CBFA2T3-209ENST00000569443 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.61□□□□□ -0.072e-6■■■■□ 19.5
CBFA2T3-209ENST00000569443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■■□□ 18.7
CBFA2T3-209ENST00000569443 PUM1Q14671 1186 aaKnown RBP eCLIP12.52□□□□□ -0.417e-11■■■□□ 17.2
CBFA2T3-209ENST00000569443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.362e-13■■■□□ 17.1
CBFA2T3-209ENST00000569443 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.58■□□□□ 0.083e-6■■■□□ 17.1
CBFA2T3-209ENST00000569443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■■■□□ 16.7
CBFA2T3-209ENST00000569443 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.263e-7■■■□□ 16.3
CBFA2T3-209ENST00000569443 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.732e-7■■■□□ 16.1
CBFA2T3-209ENST00000569443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 16
CBFA2T3-209ENST00000569443 NOLC1Q14978 699 aaKnown RBP eCLIP14.04□□□□□ -0.165e-7■■■□□ 15.8
CBFA2T3-209ENST00000569443 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■□□ 14.6
CBFA2T3-209ENST00000569443 SF3B4Q15427 424 aaKnown RBP eCLIP11.62□□□□□ -0.556e-7■■□□□ 13.8
CBFA2T3-209ENST00000569443 PCBP1Q15365 356 aaKnown RBP eCLIP14.19□□□□□ -0.142e-7■■□□□ 13.7
CBFA2T3-209ENST00000569443 TIA1P31483 386 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■□□□ 11.4
CBFA2T3-209ENST00000569443 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.446e-7■■□□□ 11.4
CBFA2T3-209ENST00000569443 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.023e-6■□□□□ 11.3
CBFA2T3-209ENST00000569443 RBFOX2O43251 390 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■□□□□ 10.7
CBFA2T3-209ENST00000569443 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■□□□□ 9.6
CBFA2T3-209ENST00000569443 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.1□□□□□ -0.155e-6■□□□□ 9.3
Retrieved 64 of 64 RNA–protein pairs in 42.9 ms