RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-217ENST00000569338 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
BBS4-217ENST00000569338 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
BBS4-217ENST00000569338 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
BBS4-217ENST00000569338 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
BBS4-217ENST00000569338 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
BBS4-217ENST00000569338 FOXD1Q16676 465 aa17.42■□□□□ 0.38
BBS4-217ENST00000569338 ADRA2BP18089 450 aa16.87■□□□□ 0.29
BBS4-217ENST00000569338 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
BBS4-217ENST00000569338 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
BBS4-217ENST00000569338 MSH5O43196 834 aa16.04■□□□□ 0.16
BBS4-217ENST00000569338 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
BBS4-217ENST00000569338 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
BBS4-217ENST00000569338 KCNA4P22459 653 aa15.43■□□□□ 0.06
BBS4-217ENST00000569338 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
BBS4-217ENST00000569338 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
BBS4-217ENST00000569338 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
BBS4-217ENST00000569338 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
BBS4-217ENST00000569338 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
BBS4-217ENST00000569338 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
BBS4-217ENST00000569338 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
BBS4-217ENST00000569338 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
BBS4-217ENST00000569338 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
BBS4-217ENST00000569338 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
BBS4-217ENST00000569338 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
BBS4-217ENST00000569338 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
BBS4-217ENST00000569338 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
BBS4-217ENST00000569338 ZBTB22O15209 634 aa14.18□□□□□ -0.14
BBS4-217ENST00000569338 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
BBS4-217ENST00000569338 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
BBS4-217ENST00000569338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
BBS4-217ENST00000569338 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
BBS4-217ENST00000569338 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
BBS4-217ENST00000569338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
BBS4-217ENST00000569338 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
BBS4-217ENST00000569338 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
BBS4-217ENST00000569338 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
BBS4-217ENST00000569338 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
BBS4-217ENST00000569338 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
BBS4-217ENST00000569338 APLP2Q06481 763 aa13.58□□□□□ -0.24
BBS4-217ENST00000569338 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
BBS4-217ENST00000569338 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
BBS4-217ENST00000569338 CAPN15O75808 1086 aa13.41□□□□□ -0.26
BBS4-217ENST00000569338 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
BBS4-217ENST00000569338 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
BBS4-217ENST00000569338 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
BBS4-217ENST00000569338 POLA2Q14181 598 aa13.17□□□□□ -0.3
BBS4-217ENST00000569338 ABCB7O75027 752 aa13.15□□□□□ -0.3
BBS4-217ENST00000569338 DSG3P32926 999 aa13.12□□□□□ -0.31
BBS4-217ENST00000569338 FBLN2P98095 1184 aa12.98□□□□□ -0.33
BBS4-217ENST00000569338 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
BBS4-217ENST00000569338 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
BBS4-217ENST00000569338 FKBP8Q14318 412 aa12.88□□□□□ -0.35
BBS4-217ENST00000569338 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
BBS4-217ENST00000569338 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
BBS4-217ENST00000569338 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
BBS4-217ENST00000569338 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
BBS4-217ENST00000569338 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
BBS4-217ENST00000569338 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
BBS4-217ENST00000569338 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
BBS4-217ENST00000569338 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
BBS4-217ENST00000569338 PROM2Q8N271 834 aa12.49□□□□□ -0.41
BBS4-217ENST00000569338 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
BBS4-217ENST00000569338 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
BBS4-217ENST00000569338 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
BBS4-217ENST00000569338 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
BBS4-217ENST00000569338 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
BBS4-217ENST00000569338 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
BBS4-217ENST00000569338 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
BBS4-217ENST00000569338 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
BBS4-217ENST00000569338 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
BBS4-217ENST00000569338 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
BBS4-217ENST00000569338 MIER1Q8N108 512 aa12.08□□□□□ -0.48
BBS4-217ENST00000569338 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
BBS4-217ENST00000569338 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
BBS4-217ENST00000569338 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
BBS4-217ENST00000569338 KLHL34Q8N239 644 aa12□□□□□ -0.49
BBS4-217ENST00000569338 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
BBS4-217ENST00000569338 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
BBS4-217ENST00000569338 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
BBS4-217ENST00000569338 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
BBS4-217ENST00000569338 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
BBS4-217ENST00000569338 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
BBS4-217ENST00000569338 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
BBS4-217ENST00000569338 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
BBS4-217ENST00000569338 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
BBS4-217ENST00000569338 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
BBS4-217ENST00000569338 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
BBS4-217ENST00000569338 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
BBS4-217ENST00000569338 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
BBS4-217ENST00000569338 NUBP1P53384 320 aa11.72□□□□□ -0.53
BBS4-217ENST00000569338 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
BBS4-217ENST00000569338 PKD2Q13563 968 aa11.67□□□□□ -0.54
BBS4-217ENST00000569338 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
BBS4-217ENST00000569338 GSE1Q14687 1217 aa11.65□□□□□ -0.54
BBS4-217ENST00000569338 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
BBS4-217ENST00000569338 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
BBS4-217ENST00000569338 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
BBS4-217ENST00000569338 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
BBS4-217ENST00000569338 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
BBS4-217ENST00000569338 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms