RNA–Protein interactions for RNA: ENST00000568964.5

LMF1-213, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 853 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-213ENST00000568964 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
LMF1-213ENST00000568964 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
LMF1-213ENST00000568964 ABCC9O60706 1549 aa40.3■■■■■ 4.04
LMF1-213ENST00000568964 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
LMF1-213ENST00000568964 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
LMF1-213ENST00000568964 NACADO15069 1562 aa38.72■■■■□ 3.79
LMF1-213ENST00000568964 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
LMF1-213ENST00000568964 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
LMF1-213ENST00000568964 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
LMF1-213ENST00000568964 UNC13AQ9UPW8 1703 aa37.77■■■■□ 3.64
LMF1-213ENST00000568964 PABPN1Q86U42 306 aaKnown RBP eCLIP37.67■■■■□ 3.62
LMF1-213ENST00000568964 SCRIBQ14160 1630 aa37.6■■■■□ 3.61
LMF1-213ENST00000568964 BICRAQ9NZM4 1560 aa37.51■■■■□ 3.6
LMF1-213ENST00000568964 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
LMF1-213ENST00000568964 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
LMF1-213ENST00000568964 EIF4G1Q04637 1599 aaKnown RBP36.58■■■■□ 3.45
LMF1-213ENST00000568964 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
LMF1-213ENST00000568964 CECR2Q9BXF3 1484 aa36.22■■■■□ 3.39
LMF1-213ENST00000568964 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
LMF1-213ENST00000568964 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
LMF1-213ENST00000568964 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
LMF1-213ENST00000568964 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
LMF1-213ENST00000568964 NCAPD3P42695 1498 aa35.71■■■■□ 3.31
LMF1-213ENST00000568964 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
LMF1-213ENST00000568964 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
LMF1-213ENST00000568964 HMGXB3Q12766 1538 aa35.55■■■■□ 3.28
LMF1-213ENST00000568964 BAZ1BQ9UIG0 1483 aaKnown RBP35.49■■■■□ 3.27
LMF1-213ENST00000568964 RSF1Q96T23 1441 aaPredicted RBP35.3■■■■□ 3.24
LMF1-213ENST00000568964 WIZO95785 1651 aa35.3■■■■□ 3.24
LMF1-213ENST00000568964 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
LMF1-213ENST00000568964 NESP48681 1621 aa34.84■■■■□ 3.17
LMF1-213ENST00000568964 ERCC6Q03468 1493 aa34.8■■■■□ 3.16
LMF1-213ENST00000568964 LAMC3Q9Y6N6 1575 aa34.79■■■■□ 3.16
LMF1-213ENST00000568964 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
LMF1-213ENST00000568964 PDS5BQ9NTI5 1447 aa34.6■■■■□ 3.13
LMF1-213ENST00000568964 CCDC88BA6NC98 1476 aa34.53■■■■□ 3.12
LMF1-213ENST00000568964 SUPT5HO00267 1087 aaKnown RBP34.5■■■■□ 3.11
LMF1-213ENST00000568964 CFTRP13569 1480 aa34.47■■■■□ 3.11
LMF1-213ENST00000568964 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
LMF1-213ENST00000568964 CUX2O14529 1486 aa34.37■■■■□ 3.09
LMF1-213ENST00000568964 FANCD2Q9BXW9 1451 aa34.32■■■■□ 3.08
LMF1-213ENST00000568964 THOC2Q8NI27 1593 aaKnown RBP34.3■■■■□ 3.08
LMF1-213ENST00000568964 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
LMF1-213ENST00000568964 MRC2Q9UBG0 1479 aa34.22■■■■□ 3.07
LMF1-213ENST00000568964 PRDM2Q13029 1718 aa34.17■■■■□ 3.06
LMF1-213ENST00000568964 WDR62O43379 1518 aa34.07■■■■□ 3.04
LMF1-213ENST00000568964 URB2Q14146 1524 aaKnown RBP33.93■■■■□ 3.02
LMF1-213ENST00000568964 ABCC8Q09428 1581 aa33.78■■■■□ 3
LMF1-213ENST00000568964 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
LMF1-213ENST00000568964 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
LMF1-213ENST00000568964 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
LMF1-213ENST00000568964 CUX1P39880 1505 aa33.48■■■□□ 2.95
LMF1-213ENST00000568964 POLA1P09884 1462 aaPredicted RBP33.46■■■□□ 2.95
LMF1-213ENST00000568964 FGD5Q6ZNL6 1462 aa33.39■■■□□ 2.94
LMF1-213ENST00000568964 ZNF608Q9ULD9 1512 aaPredicted RBP33.36■■■□□ 2.93
LMF1-213ENST00000568964 SOGA1O94964 1423 aa33.36■■■□□ 2.93
LMF1-213ENST00000568964 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
LMF1-213ENST00000568964 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.933e-6■■■■■ 66.3
LMF1-213ENST00000568964 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
LMF1-213ENST00000568964 DNAJC5Q9H3Z4 198 aa33.26■■■□□ 2.91
LMF1-213ENST00000568964 EIF4G3O43432 1585 aaKnown RBP33.25■■■□□ 2.91
LMF1-213ENST00000568964 TOP2BQ02880 1626 aa33.2■■■□□ 2.91
LMF1-213ENST00000568964 AQRO60306 1485 aaKnown RBP eCLIP33.19■■■□□ 2.9
LMF1-213ENST00000568964 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
LMF1-213ENST00000568964 BIVM-ERCC5R4GMW8 1640 aa33.19■■■□□ 2.9
LMF1-213ENST00000568964 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
LMF1-213ENST00000568964 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
LMF1-213ENST00000568964 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
LMF1-213ENST00000568964 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
LMF1-213ENST00000568964 GRIN2BQ13224 1484 aa32.97■■■□□ 2.87
LMF1-213ENST00000568964 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
LMF1-213ENST00000568964 SNAPC4Q5SXM2 1469 aa32.92■■■□□ 2.86
LMF1-213ENST00000568964 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
LMF1-213ENST00000568964 FBLN2P98095 1184 aa32.88■■■□□ 2.85
LMF1-213ENST00000568964 MAGI1Q96QZ7 1491 aaPredicted RBP32.87■■■□□ 2.85
LMF1-213ENST00000568964 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
LMF1-213ENST00000568964 CHD1O14646 1710 aa32.79■■■□□ 2.84
LMF1-213ENST00000568964 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
LMF1-213ENST00000568964 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
LMF1-213ENST00000568964 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
LMF1-213ENST00000568964 KIF27Q86VH2 1401 aa32.65■■■□□ 2.82
LMF1-213ENST00000568964 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
LMF1-213ENST00000568964 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
LMF1-213ENST00000568964 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
LMF1-213ENST00000568964 GRIN2AQ12879 1464 aa32.53■■■□□ 2.8
LMF1-213ENST00000568964 IGF1RP08069 1367 aa32.45■■■□□ 2.79
LMF1-213ENST00000568964 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
LMF1-213ENST00000568964 ARHGEF11O15085 1522 aa32.4■■■□□ 2.78
LMF1-213ENST00000568964 CUL7Q14999 1698 aa32.39■■■□□ 2.78
LMF1-213ENST00000568964 RIMBP3CA6NJZ7 1639 aa32.38■■■□□ 2.77
LMF1-213ENST00000568964 RIMBP3BA6NNM3 1639 aa32.38■■■□□ 2.77
LMF1-213ENST00000568964 RIMBP3Q9UFD9 1639 aa32.38■■■□□ 2.77
LMF1-213ENST00000568964 NUP160Q12769 1436 aa32.36■■■□□ 2.77
LMF1-213ENST00000568964 CEP170Q5SW79 1584 aa32.33■■■□□ 2.77
LMF1-213ENST00000568964 CARMIL1Q5VZK9 1371 aa32.31■■■□□ 2.76
LMF1-213ENST00000568964 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
LMF1-213ENST00000568964 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
LMF1-213ENST00000568964 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
LMF1-213ENST00000568964 ARAP1Q96P48 1450 aa32.13■■■□□ 2.73
LMF1-213ENST00000568964 RAPGEF2Q9Y4G8 1499 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms